Afipia carboxidovorans OM4: OCA4_c02310
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Entry
OCA4_c02310 CDS
T01967
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit SdhA
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco00020
Citrate cycle (TCA cycle)
oco00190
Oxidative phosphorylation
oco00650
Butanoate metabolism
oco00720
Other carbon fixation pathways
oco01100
Metabolic pathways
oco01110
Biosynthesis of secondary metabolites
oco01120
Microbial metabolism in diverse environments
oco01200
Carbon metabolism
Module
oco_M00009
Citrate cycle (TCA cycle, Krebs cycle)
oco_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
oco_M00149
Succinate dehydrogenase, prokaryotes
oco_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
OCA4_c02310 (sdhA)
00650 Butanoate metabolism
OCA4_c02310 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
OCA4_c02310 (sdhA)
00720 Other carbon fixation pathways
OCA4_c02310 (sdhA)
Enzymes [BR:
oco01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
OCA4_c02310 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
DAO
GIDA
HI0933_like
Thi4
Motif
Other DBs
NCBI-ProteinID:
AEI01386
LinkDB
All DBs
Position
complement(247967..249781)
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AA seq
604 aa
AA seq
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MASNGKAAAGPAYPIEDHTYDVVVVGAGGAGLRAVVGCSEAGLRTACITKVFPTRSHTVA
AQGGISASLGNMHPDDWRWHMYDTVKGSDWLGDQDCIEYMVRNAPEAVYELEHWGVPFSR
TEDGKIFQRPFGGMTRDYGKGQAQRTCAAADRTGHAMLHTMYGQAVRHSAEFFIEFFAID
LIMDDQGVCRGAIALKLDDGTLHRFRAQTTILATGGYGRAYLSCTSAHTCTGDGGGMVLR
AGLPLQDMEFVQFHPTGIFPAGCLITEGARGEGGYLVNAEGERFMERYAPSAKDLASRDV
VSRAMTIEIREGRGVGKRKDHMFLHLDHLDPAVLHDRLPGISESARIFAGVDVTREPIPV
LPTVHYNMGGIPTNFHGEVVVKKRGDDDAVVPGLMAVGEAACVSVHGANRLGSNSLIDLV
VFGRSAALRCAEKLTPNGKQPELPADSAEKALARLDHFRYASGGTPTAKLRDSMQRVMQN
NCAVFRTGEVLHEGKDLIHKVHSGLTDISVTDRSLIWNTDLVETLEFDNLIIQAVVTMES
AVNRTESRGAHAREDFPERDDKNWMKHTLAWIDPKANTTIDYRPVHSYTMTNDIQYIPPK
ARVY
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaacggcaaggctgcggcagggcccgcctatccgatcgaggaccacacctac
gatgtcgtcgtggtcggcgcgggcggtgcgggcttgcgcgccgtggtcggctgctcggaa
gcgggtttgcgcacggcctgcatcacaaaggtgtttccgacccgctcgcacactgtcgcg
gcgcagggcggcatctccgcttcgctcggcaacatgcatccggatgactggcgctggcac
atgtacgacaccgtgaaggggtcggactggctcggcgatcaggactgcatcgaatacatg
gtgcgcaacgcacccgaagccgtctacgaactcgagcattggggcgtgccgttctcccgc
accgaagacggcaagatcttccagcgcccgttcggcggcatgacccgcgactacggcaag
ggccaggcgcaacgcacctgcgccgctgccgaccgcaccggccacgccatgctgcatacg
atgtatggccaggcggtgcgccactcggcggagttcttcatcgagttcttcgccatcgat
ctcatcatggacgatcagggcgtctgccgcggcgcgatcgcgctcaagctcgacgacggc
acgctgcatcgtttccgcgcccagaccaccattctcgcaactggcggctatggccgcgcc
tatctctcctgcacctcggcacacacctgcaccggcgacggcggcggcatggtgctacgc
gcgggtctgccgctgcaggacatggagttcgtgcaattccatccgaccggcatctttccc
gcaggctgcctcatcaccgaaggcgcacgcggcgaaggcggctatctcgtcaatgccgag
ggcgaacgcttcatggagcgctatgcgccctccgccaaggacctcgcctcgcgcgacgtc
gtctcgcgtgcgatgaccatcgagattcgcgaaggccgcggtgtcggcaagcgcaaggac
catatgttcctgcacctcgatcatctcgatccggcagtgctgcacgaccggttgccgggc
atctcggaatcggcgcgcattttcgcaggcgtcgacgtcacccgcgaaccgatcccggtg
ctgccgacggtgcactacaacatgggcggcatcccgaccaacttccacggcgaagtggtt
gtgaagaagcgcggcgacgacgacgccgtggtgcccggcctgatggcggtcggcgaagcc
gcctgcgtctccgtgcatggcgcgaaccgcctcggctcgaactcgctgatcgatctcgtc
gtgttcggccgctcggcggcgctgcgctgcgccgagaagctcacgccgaacggcaagcag
ccggagttgcccgccgattccgccgagaaggccctcgcccgtctcgaccacttccgttac
gcctccggcggcacgccgaccgcaaagctgcgcgattccatgcagcgcgtgatgcagaac
aactgcgcggtgttccgcaccggcgaagtgctgcacgagggcaaggacctgatccacaag
gtccacagcggactcaccgacatcagcgtcaccgaccgctcgctgatctggaacaccgat
ctcgtcgagactctcgaattcgacaacctcatcattcaggcggtggtgacgatggaatcc
gctgtcaaccgcaccgagagccgcggcgcgcatgcgcgcgaggatttcccggagcgcgac
gacaagaactggatgaagcacacgctggcgtggatcgaccccaaggccaacaccacgatc
gattaccgcccggtgcacagctacacgatgaccaacgacattcagtacatcccgccgaag
gcgcgcgtgtactga
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