Afipia carboxidovorans OM4: OCA4_c03520
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Entry
OCA4_c03520 CDS
T01967
Name
(GenBank) hypothetical protein
KO
K07459
putative ATP-dependent endonuclease of the OLD family
Organism
oco
Afipia carboxidovorans OM4
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
OCA4_c03520
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Gene cluster
GFIT
Motif
Pfam:
AAA_15
AAA_21
DUF2813
SMC_N
AAA_23
AAA_29
OLD-like_TOPRIM
AAA_27
Transglut_core
Motif
Other DBs
NCBI-ProteinID:
AEI01506
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Position
362234..364081
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AA seq
615 aa
AA seq
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MRVRRLKITNFRGISQGSVDFDGHTLLVGGNNIGKSTICEALDLVLGPERLFRRPVIDEH
DFHCGKYLDDDGAPIEVRIEAILVDLSDEAKRRFCGHLRRWNDTACVFIDDADDALDHAD
AADAMWALPLLFVGRYDRDEDDFIGNTFFDHPSKDVDPLDEETEIRLGQGRVPFTRMHKR
LCGFVFLRTLRTGSRALSLQRGSLLDSVLKLGGTGAVEMWQDTLARLQSLDPAIGEITQL
KHIRDEIRARMGRFINLAPGDESTGFFASDLTREHLREVVRLFVAAQPGQHLVPFGRLGT
GSINLLVFALLTFIAELKDKQSVIFAMEEPEIALPPHTQRRVTRFILAEMGQSIVTSHSP
YVIEQFDPEQIVILNRNETGALTGQPINVDAVKPKTFRTERRQFAEAILSRAVLVVEGST
EASLFPVASSIMEASLGADAYTHLDLAGVSIFNAGGDGSVPRHGSVFSALGKLSFGFYDK
PNAALTPAATEKLKEYTQFWESPEKGIETVLVKQMPVAVVRRFLDEVKDRSDYPAVGTYD
PAAVDADVVALASKVLKARKGDAHGYAAMLVAQCQNADELPATIREILETIHKALSAVPE
DIAAPPMDELEGLLG
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgttcgtcgacttaagatcaccaattttcgcgggatctctcaaggcagcgtcgat
ttcgacgggcatacattgctcgttgggggaaataacatcggaaaatcaacgatctgtgag
gcgctcgatctcgttctcgggcctgagagattgtttcgccgccccgttatcgacgaacac
gactttcactgtggcaagtatctcgacgacgacggtgcgccgatcgaggttcggatcgaa
gccattctggtcgatctatcggacgaggccaagcgccgattctgcggccatctcaggcgt
tggaacgacacggcctgcgtatttatcgacgacgccgacgacgcgcttgaccacgctgat
gcagcagatgcgatgtgggcgctgccgctgctgttcgtgggacgttatgaccgtgatgag
gacgacttcatcggcaacacgttcttcgatcatccctcgaaggacgtcgaccccctcgac
gaggaaaccgaaattaggcttgggcagggacgtgtgccgttcacgcgaatgcacaagcgg
ctgtgcggctttgtcttcctcagaacgctacgaaccggatcacgggcactgagtctccag
cgagggtcgctgctcgactcggtgctgaagcttggcggcacaggcgctgtcgagatgtgg
caggacactcttgccaggcttcagagccttgatcccgccattggtgagatcacgcagctg
aagcacatacgcgacgaaattcgcgcgcggatgggacgtttcatcaatctggcgccgggc
gacgagtcgaccgggttctttgcctccgacttaacacgggagcatttgcgcgaggtcgtg
cggttgttcgttgccgcgcagcctggtcagcatctcgtgccattcggccggcttggcact
gggtcgatcaatctactggtcttcgcgctgctgacgttcatagcggagttgaaggacaag
cagtcggtgatcttcgcgatggaggagccggaaatcgcactgccgccgcacactcagcgc
cgcgtcacccgcttcattctggcggagatgggacagtcgatcgtcacctcgcactcgccc
tatgtgatcgaacagttcgacccggagcagattgtcattctcaatcggaatgaaaccggc
gcgctcaccggacagccgatcaatgtcgatgcagtgaagccaaagaccttcaggactgag
cggcggcagttcgctgaggcgatcctcagccgcgcggtgctggtcgtagagggatcgacc
gaagcatcgctgttccccgttgcatcatcgatcatggaggcgagtctcggcgccgacgct
tatacccacctcgacctcgccggcgtcagcatctttaacgccggtggagatggatcggtg
ccgcgccacgggtcggtcttttcggcgctcggcaagctctccttcggcttctacgacaaa
ccgaatgcggcactgacaccggcggccaccgaaaagctgaaagagtacacccaattctgg
gagtcgccggagaagggcatcgagaccgtcctagtgaagcagatgcccgtcgctgtggtg
cgtcggttcctcgacgaggtgaaggatcgatcggactatccggctgtgggcacctatgac
ccagcggccgtggatgcagacgtcgtcgcgctagcgagcaaagtactgaaggcgcgcaag
ggtgacgcccatggctatgccgccatgctcgtggcccaatgtcagaacgctgacgaactg
cccgcgacaatccgcgaaattctggaaacgatccacaaagcgctgagtgctgtgcctgaa
gacatcgcagcacctccgatggacgaacttgagggtcttcttggatga
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