Afipia carboxidovorans OM4: OCA4_c04300
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Entry
OCA4_c04300 CDS
T01967
Symbol
xerD
Name
(GenBank) tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
oco
Afipia carboxidovorans OM4
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oco03036
]
OCA4_c04300 (xerD)
Chromosome and associated proteins [BR:
oco03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
OCA4_c04300 (xerD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
AEI01581
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All DBs
Position
complement(450690..451640)
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AA seq
316 aa
AA seq
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MAASSDATTIELFLDMLAAEQGAGDNTLNAYRSDLEDLSAFLAHAKTDFARADTQALRDY
LADLDRRGFKSSSVARRLSSTRHLFRFLLNERKRSDDPAAILAGPKRGRPLPKVLSIADV
DRLLGKAREFADQEQAPLQKLRAMRLWCLLEVLYATGLRVSELVALPLSAAKRDARMIVV
RGKGDKERLVPLNQSSREAMTAYLAATEAAKTDKTKSEPRSKWLFPSSGESGHLTRQHFA
RDLKELAMAAAISPRLISPHVLRHAFASHLLHNGADLRIVQTLLGHTDISTTQIYTHVVE
ERLKSLVRDLHPLAEK
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggccgcatcctccgacgcaaccacgatcgagctgtttctcgacatgctcgccgccgaa
cagggtgccggcgacaacacgctcaacgcctatcgcagcgacctcgaggatctgtctgct
tttctcgcacacgccaagacagactttgcgcgcgccgacacgcaggcgctgcgcgactat
ctcgccgatctcgaccggcgcggcttcaaatcctccagcgttgcgcggcggctatcatcg
acgcggcacctgttccgctttctcctgaacgagcgcaagcgcagcgacgatcctgctgcg
attctcgcaggtccgaaacgcggccgccctttgcccaaggtgttgtcgattgccgacgtc
gatcgcctgctcggcaaggcgcgcgagttcgccgatcaggagcaggcaccactgcaaaag
ctgcgcgcgatgcggctgtggtgcctgctcgaagtgctgtatgcaaccggcctgcgcgtc
tccgaactggtggcgctgccgctctcggcggccaagcgcgatgcacgcatgatcgtggtg
cgcggcaagggcgacaaggagcgtctcgttccgctcaatcaaagttcgcgcgaggcgatg
accgcctatctcgccgcaactgaagccgccaaaaccgacaagacgaaatccgaaccgcgc
tcgaaatggctgtttccctcgtcaggcgagagtggccatctgacgcggcagcattttgcc
cgcgacctcaaggaactggcgatggcagccgccatctcgccgcgcctcatcagcccgcat
gtgctgcgccatgccttcgcaagccatctgctgcataacggcgcggacctgcgcatcgtg
cagacgctgctcggccacaccgatatctcgacgacgcagatctatacccatgtcgtcgag
gagcgcttaaagagcctggtgcgcgacctgcacccgctcgccgaaaaataa
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