Afipia carboxidovorans OM4: OCA4_c05310
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Entry
OCA4_c05310 CDS
T01967
Name
(GenBank) transcriptional regulator, LysR family
Organism
oco
Afipia carboxidovorans OM4
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_50
SBP_bac_11
PBP_like_2
HTH_Tnp_4
HTH_24
HTH_AsnC-type
HTH_30
HTH_34
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
AEI01681
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Position
556615..557808
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AA seq
397 aa
AA seq
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MNPVYENMGEAVVAISVALTDVSNARKPETTTNFGAGGFPSSNNEWVGKGIDADERSRLA
DGDESAKRSETSISQNPREQNRISIQESFARGGSPLGSRITLTALIQTLAVAEYLNFRHA
ANALGVSQSSISERIKALEDTFGIPLFERHARGVKLTDAGRCFVERVAISVAQLDHAVKT
IGMMARGDRGRLRIGVHALIPGSFLTEVIGQYHAQYPDVDVEIAEGTASEVVSQLRAGRL
DVAFVAGTPEYPDLHSTCIWTEPLVVALPANHPLVDRNGITWADLAGEAFLVRYGGTGPQ
VHDHILLRLAGRWLSPSILRLAVERGSLLSMIAQGYGVTIAGSAHTLIRPPGVVFLPFLD
EPEPVPFSGVWSPHNRSAVLRNLLDLANQMSRGARTP
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccggtctacgagaatatgggcgaggctgtcgtcgctatatccgtcgccctcact
gacgtctccaatgcccgtaaaccggagacgacgacaaatttcggtgctggtggttttccg
tcgtcgaacaacgagtgggtagggaaagggattgatgccgatgagcggtcgaggctcgcg
gacggtgatgagtccgccaagcgctctgaaacttcgatctctcaaaatccgcgagaacag
aatcgaatatcgattcaggaaagtttcgcgcggggtggttcgccgctcgggtcgcgcatc
acgctgacggcgctaattcaaactctagcagtcgccgagtatctgaatttccgccatgcg
gcgaatgcactgggcgtcagtcagtcgagcatcagcgagcgcatcaaagctcttgaagac
acgtttggcatcccgctattcgagcgtcatgctcgcggcgttaagctaaccgatgctgga
cgatgtttcgtcgagcgggtggcgataagcgtcgcgcagctcgaccatgccgtgaaaacg
atcgggatgatggcgcggggcgaccgtggccggttgcgtatcggtgttcatgcgctcatt
cccggcagctttctgaccgaggtgatcggccagtatcacgcgcagtatcccgacgtcgac
gtggagatcgccgaagggacggcatccgaggtggtgagccaactgcgcgccggtcgtctc
gacgtggcgttcgtcgccggcacgccagaatatcccgatttacactcgacatgcatctgg
accgagccgctggtggtcgcgctgccggccaaccatccgctcgtcgaccgcaatggtatc
acctgggccgatctggcgggtgaagcctttctagtccgctatggcggcacgggaccgcag
gtacatgaccatatcctgctgcgtttggctgggcgctggctctctccgtcgatccttcgc
cttgctgtcgagcgcggctcgctgctgtcgatgattgcgcaaggctacggcgtgacgatc
gctgggagcgcgcatacacttattcgacctcccggcgtcgtattcctgccgttcctcgat
gagccggagccggtgccgttctcaggggtctggtcgccgcacaatcgcagtgcggttcta
aggaatctgctcgatctcgcaaaccagatgagccgaggtgctcgcaccccatga
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