Afipia carboxidovorans OM4: OCA4_c06400
Help
Entry
OCA4_c06400 CDS
T01967
Symbol
livF1
Name
(GenBank) ABC transporter, branched-chain amino acid transport ATP-binding protein LivF
KO
K01996
branched-chain amino acid transport system ATP-binding protein
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco02010
ABC transporters
oco02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
OCA4_c06400 (livF1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OCA4_c06400 (livF1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oco02000
]
OCA4_c06400 (livF1)
Transporters [BR:
oco02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
OCA4_c06400 (livF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_23
AAA_29
nSTAND1
AAA_15
AAA_22
Mg_chelatase
ABC_ATPase
AAA_30
AAA_19
AAA_27
AAA_16
NACHT
cobW
Motif
Other DBs
NCBI-ProteinID:
AEI01789
LinkDB
All DBs
Position
673652..674368
Genome browser
AA seq
238 aa
AA seq
DB search
MSGNLVTNNITAAYGSARVLSGVSIVAKAGAITCILGANGSGKTSLIRAILGLLPVLEGD
VSLDGEALNGLATHVRIARGVGCVPEGRKLFPKMTVEENLRVGAYLVKDKSVVAERLEKV
YATFPRLAERKQQFAGTMSGGEQAMVSIGRALMSEPRILLIDEPSLGLSPALVRDSFAII
RDINKSGVSVLLVEQNVRQTLAIADYGYVISQGAVVAEGTSQDLLNDEEMKKAYFGVH
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaaatcttgtcaccaacaacatcaccgccgcttacggcagtgcccgcgtgctg
tccggggtgtccatcgtggcgaaggccggcgccatcacctgcattctcggcgccaacggc
tccggcaagacgtcgctgatccgcgccatcctcggcctgctgcctgtgctcgaaggcgac
gtctcgctcgacggtgaggcgttgaacggccttgccacccatgtccgcatcgcgcgcggg
gtcggctgcgtgccggaaggccgcaagctgtttccgaaaatgacggtcgaggaaaacctt
cgcgtcggggcctatctggtcaaggacaagtccgtcgtcgcggagcggctcgagaaagtc
tatgcgacgtttccgcggttggccgagcgcaagcagcagttcgccggcacgatgtccggc
ggcgagcaggcaatggtgtcgatcggccgggcgctgatgagcgagccgcgcattctcctg
atcgacgagccgtcgctcggcctgtcgccggcgctggtgcgtgattcgttcgccatcatc
cgcgacatcaacaaatcgggcgtgtcggtgctgctggtcgagcagaacgtccggcagacg
cttgcgatcgccgattacggctatgtcatcagtcagggcgccgtcgtcgccgaaggcacg
tcgcaggatcttctgaacgatgaggaaatgaagaaggcctatttcggcgtgcactaa
DBGET
integrated database retrieval system
