Afipia carboxidovorans OM4: OCA4_c06570
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Entry
OCA4_c06570 CDS
T01967
Name
(GenBank) transcriptional regulator, LysR family
KO
K19338
LysR family transcriptional regulator, nitrogen assimilation regulatory protein
Organism
oco
Afipia carboxidovorans OM4
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oco03000
]
OCA4_c06570
Transcription factors [BR:
oco03000
]
Prokaryotic type
Helix-turn-helix
LysR family
OCA4_c06570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AEI01806
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Position
complement(688991..689917)
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AA seq
308 aa
AA seq
DB search
MDLRQLRSLVYIADSGSLSRAAEILRTSQPSLSQQIKDLEAELGMELFHRHARGVFLTEV
GHTLYAHARSILKDVAFAKETVVNQSRNPSGKVLVGFPTSACRGLSAALIEKVKVNYPNI
SIHLIEAMTGTLDEWMQNARLDIAVLYDPRVFANISLHPVGIEDLVLVADSKNPILHRNS
IGFSELESIPLVLPGKQHVLRNYIEHLSTRNGITPRVIIESDSFNAIVELVKAGYMTIMP
HFAMLQEIKAGLFGTVAIMNPTPNWRVSVVVSQRPINMLSTEAVARVLIELMRNLIHDGT
WRARALSE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggatctgagacagttgcgatcgttggtgtacatcgccgattccggcagcctttcgcgt
gccgccgagattctgcgcacctcgcagccctcgctcagccagcagatcaaggatctcgaa
gccgaactcggcatggaattgtttcatcgccatgcgcgcggcgtgtttctcaccgaagtc
ggccacacgctgtatgcgcatgcgcgctcgatcctcaaggacgtcgctttcgccaaggaa
accgtcgtcaatcagtcgcgcaacccgagcggcaaggtgctggtcggctttccgacatcc
gcctgccgcggattgtctgccgcactgatcgagaaggtgaaggtgaattatccgaacatc
tcgattcatctgatcgaggcgatgaccggcacgctcgacgaatggatgcagaacgcgcgg
ctcgacatcgcggtgctgtacgatccgcgcgtgttcgccaacatctcgctgcatcctgtc
ggcatcgaagatctggtgctggtggccgacagcaagaacccgatccttcaccgtaattcg
atcggcttctccgagctggagagcattccgctggtgctgccaggcaagcagcatgtgctg
cgcaactacatcgagcatctctccacccgcaacggcattacgccgcgggtgatcatcgag
agcgactcgttcaacgccatcgtggaactggtgaaggccggctacatgacaattatgccg
cacttcgcgatgttgcaggaaatcaaggcgggcctgttcggcaccgtcgccatcatgaac
ccgacgccgaactggcgggtctcggtcgtcgtctcgcagcggccgatcaacatgctctcc
acggaagccgtggcccgcgtgctgatcgaactaatgcgcaacctgatccatgacggaaca
tggcgggcgcgggcactttcggaataa
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