Afipia carboxidovorans OM4: OCA4_c07420
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Entry
OCA4_c07420 CDS
T01967
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco00061
Fatty acid biosynthesis
oco00071
Fatty acid degradation
oco01100
Metabolic pathways
oco01212
Fatty acid metabolism
oco02024
Quorum sensing
oco04146
Peroxisome
Module
oco_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
OCA4_c07420 (fadD)
00071 Fatty acid degradation
OCA4_c07420 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
OCA4_c07420 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
OCA4_c07420 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
oco01004
]
OCA4_c07420 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oco04147
]
OCA4_c07420 (fadD)
Enzymes [BR:
oco01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
OCA4_c07420 (fadD)
Lipid biosynthesis proteins [BR:
oco01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
OCA4_c07420 (fadD)
Exosome [BR:
oco04147
]
Exosomal proteins
Exosomal proteins of breast milk
OCA4_c07420 (fadD)
Exosomal proteins of breast cancer cells
OCA4_c07420 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AEI01891
LinkDB
All DBs
Position
complement(787155..788837)
Genome browser
AA seq
560 aa
AA seq
DB search
MERVWLKSYPPGVPAEIDTSRYASLVDLIEESLKTYADRTAFTCMGTSLSYREYNACSAA
LAAYLQSLKLSPGARVGIMMPNVLQHPIASTAILRAGYVAVNINPLYTPRELEVQLNDSG
AEAIIVLENFAHTLEKVHAETAMRHVIVATLGDLMGMKGWLVNFVVRHVKKMVPAFSLPG
AVGFNDALTRGCKVPFKRPTLGPDDIAFLQYTGGTTGIAKGAVLLHRNIVANVLQNDAWL
QPALKKKPVDGQFLQVCALPLYHIFALSACFLLTLRAGGASLLIPNPRDIPGFIKELKRY
RVHSLPAVNTLYNALLHAPGFDEIDFSGLIACAGGGMAVQRAVAEEWKKRTGCAIAEGYG
LSETSPVLTCNPSDIEDFNGTVGLPVPSTLISIRDDTDNEVPLGERGEVCASGPQVMQGY
WNRPEETAQAMTADGYFRTGDIGLFTPEGYLRIVDRKKDMILVSGFNVYPNEVEEVLASH
PGVRECAVIGVPDGKSGEVVKAFVIRKDPALTEDALIAYAVERLSKYKAPKRIEFRTELP
KSNVGKILRRALRDEETARQ
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtgtctggctcaagagttatccgcccggcgttccagcggagatcgacacgagc
cgttacgcctcgctggtcgatctgatcgaagagagcctcaagacctacgctgaccgtacc
gcgttcacctgcatgggcacctcgctcagctatcgcgagtacaacgcgtgttccgcagcg
ctcgccgcctatctgcaaagcctcaagctcagccctggcgcgcgcgtcggcatcatgatg
ccgaacgtgctgcagcatccgatcgcctcaaccgcgattttgcgcgcgggttatgtcgcc
gtgaacatcaatccgctctacacgccgcgcgaactcgaagtgcagttgaacgacagcggt
gccgaagcgatcatcgttctggagaacttcgcgcacacgctggagaaggtgcacgccgaa
accgcgatgcgtcatgtcattgtcgcaacgctgggcgatctgatgggcatgaagggatgg
ctcgtcaatttcgtcgtgcgccacgtcaagaaaatggtgcctgcgttctcgctgcccggc
gcggtgggcttcaacgatgcgctgacgcgcgggtgtaaggtgccgttcaagcggcccacg
ctcggcccggacgacatcgccttcctgcaatacaccggcggcaccaccggcatcgccaag
ggcgcggtgctgcttcatcgcaacatcgtcgccaacgtgctgcagaacgatgcatggctg
cagccggcactgaagaaaaagcccgtcgacggccagtttctgcaggtctgcgcgctgccg
ctctatcatatcttcgcgctcagcgcctgtttcctgctgacgctgcgtgcgggcggcgcg
agccttttgattcccaacccgcgcgacattccgggcttcatcaaggaattgaaacgctac
cgcgttcacagcctgcccgccgtcaacacgctctacaacgcgctgctgcatgcgccgggc
ttcgacgagatcgacttcagcggcctcatcgcctgcgcgggcggcggcatggcggtgcag
cgcgccgtcgccgaggaatggaagaagcgcaccggctgcgccatcgccgaaggctacggc
ctgtcggaaacctcgccggtgctgacctgcaatccctccgacatcgaggacttcaacggc
accgtcggcctgccggtaccctcgacattgatctcgatccgcgatgatacggataacgaa
gtgccgctcggcgaacgcggcgaagtctgcgccagcggcccgcaggtgatgcagggctac
tggaacagaccggaggaaaccgcgcaggcgatgacggccgatggttacttccgcaccggc
gatatcggactgttcacgcctgagggttatctgcggatcgtggatcgcaagaaagacatg
atcctggtgtctggcttcaacgtctaccccaacgaagtcgaggaggttctggcaagccac
cccggcgtgcgggaatgcgcggtgatcggcgtgccggacggcaagtccggcgaggtggtg
aaggctttcgtcatcaggaaggaccctgcactcaccgaagacgccttgatcgcctacgcc
gtcgagcggctcagcaagtacaaggctccgaagcgcatcgaattccgcaccgaactgccg
aaatccaacgtcggaaaaattcttcgccgcgcgctgcgtgacgaagagactgcgaggcaa
tga
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