Afipia carboxidovorans OM4: OCA4_c07510
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Entry
OCA4_c07510 CDS
T01967
Symbol
xdhB
Name
(GenBank) xanthine dehydrogenase, molybdoprotein XdhB
KO
K13482
xanthine dehydrogenase large subunit [EC:
1.17.1.4
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco00230
Purine metabolism
oco01100
Metabolic pathways
oco01120
Microbial metabolism in diverse environments
oco01232
Nucleotide metabolism
Module
oco_M00958
Adenine ribonucleotide degradation, AMP => Urate
oco_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
OCA4_c07510 (xdhB)
Enzymes [BR:
oco01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
OCA4_c07510 (xdhB)
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GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
Motif
Other DBs
NCBI-ProteinID:
AEI01900
LinkDB
All DBs
Position
complement(797646..799985)
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AA seq
779 aa
AA seq
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MDKTAAEVLPSQAFGAVHTSVAHESAARHVSGTAVYIDDMPEPAGLLHAYLALSNISHGM
IRALDLSAVRAAPGVVGVLTASDIPGLNDMSAMNRKDEPILAKDKIEFDGQALFAVIAQT
REQARRACSLAKIDYDELPAAIDFADIDTRNGKLVTEPLVLTRGDTEAEIASAPHSLSGE
IRIGGQEHFYLEGQIAMAMPNDGDEIMVYSSTQYPAEVQRTVAHALNVPFHAVEIHTRRM
GGAFGGKETQATQFAAIAALAAQKFNKPIKIRPDRDDDMRLTGKRHDFNVSYRVGFDDDG
RIRGVDYHYALRCGYSADLSGAVADRALLHCDNTYYYPAVHAVSAPLYTNTASNTAFRGF
GGPQGVLGCERVMEEIAFALGKDPLEVRKANFYGTRDCNITPYRQEVEDNIIGRLVRELE
KTSEYARRRREIRAFNAQNRFIKRGLALVPVKFGMSFTNTNSNQAGALLHVYTDGSVQIN
HGGTEMGQGLYIKVAQVVAQELNIDISQIKATATTTGKVPNASATAGSTGSDLNGMAARD
AAIKIRKRLAAFAAKTYGGTPDDVAFLPGCVQVGSTRITFADLVKQAQFARVQLSATGFY
KTPKISWDRTKAFGKPYYYFAYGASCSEVSIDTLTGEYIVERVDILHDAGKSLNMAIDIG
QIEGGFIQGMGWLTTEELIWGRNGFLRTHAPSTYKIPLASDRPKIFNVALTGWSRNHEAI
SYRSKGVGEPPLLHGISVLHALSDAVASVANHCICPRLDAPATPERVLMAIERLRAQSG
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaccgcggctgaagttctgccctcccaggctttcggcgccgttcacaccagc
gtcgcgcatgaatccgccgcacgccacgtcagcggcaccgccgtctacatcgacgacatg
cccgagccagccgggctgctgcacgcctatctcgcgctctcgaacatctcccacggaatg
atccgcgcgctcgacctctcggctgtgcgtgccgcgccgggcgtggtcggcgtgctcacg
gcgagcgacattccgggcctcaacgacatgagcgcgatgaaccggaaggacgagcctatc
cttgccaaagacaagatcgagttcgacggtcaggcccttttcgccgtgatcgcgcagacc
cgcgagcaggcacggcgcgcctgctcgctcgcgaagatcgactacgacgagctacccgcc
gcgatcgacttcgccgatatcgacaccagaaatggcaagctcgtcaccgagccgctggtg
ctcacgcgcggcgataccgaggcagaaatcgcatccgcgccgcacagcctgtcaggcgaa
attcgcatcggcgggcaggagcatttctacctcgaagggcaaatcgcaatggcgatgccc
aacgacggtgacgagatcatggtctattcgtcgacgcagtatcccgccgaggtgcagcgg
accgtcgcgcacgctctcaacgtgccgttccatgccgtcgagattcatacccgccggatg
ggcggcgcgttcggcggcaaggaaacccaggcgacacagttcgcggcgattgccgcgctc
gccgcacagaagttcaacaagccgatcaagatccgcccggatcgcgacgacgatatgcgc
ctcaccggcaagcggcacgacttcaacgtcagctatcgtgtcggcttcgatgacgacggc
cgcattcgcggcgtggactatcactatgcgctgcgctgcggctattccgcggacctgtcc
ggtgccgtcgccgaccgcgcgctgctccactgcgacaacacctattactatcccgcggtg
catgcggtgtccgcgccgctctacaccaacacggcgtccaacaccgcattccgtggcttc
ggcgggccgcagggcgtgctcggctgcgagcgcgtaatggaagagatcgcattcgcgctc
ggcaaggacccgcttgaagtccgcaaggcgaatttctacggcacgcgcgattgcaacatc
acgccgtaccggcaagaggtcgaagacaacatcatcggccgtctggtgcgcgagctggaa
aagacctcggagtacgcgcgtcgccgccgtgagattcgtgcgttcaatgcgcagaatcgt
ttcatcaaacgcgggctcgcgctggtgccggtgaagttcggaatgtcgttcaccaacacc
aattccaatcaggccggcgcgctgctgcacgtctataccgacggctccgtgcagatcaat
cacggcggcaccgagatgggccagggcctttacatcaaggtcgcacaggtcgtcgcgcag
gaattgaacatcgacatttcgcagatcaaggcgactgcgaccactaccggcaaggtgccg
aacgcatcggccaccgcgggctcgaccggctcggacctgaacggcatggcggcgcgcgat
gccgcgatcaagatccgcaagcgcctcgccgccttcgccgccaagacctatggcggcaca
ccggacgacgtcgccttcctgccgggctgcgtgcaggtcggcagcacgcgcatcaccttt
gccgatctggtgaagcaggcgcagttcgcccgcgtgcagttgtccgccaccggtttctac
aagacgccgaagatcagttgggatcgcaccaaggcattcggcaagccgtattattacttc
gcctacggcgcgtcgtgttcggaggtcagcatcgacactctgaccggcgaatatatcgtc
gagcgcgtcgatatcctgcacgatgcgggaaagtcgctgaacatggcgatcgatatcggc
cagatcgaaggcggcttcattcagggcatgggttggctcaccaccgaggagctgatctgg
ggccgcaacggattcctgcgcacccatgcgccctcgacctacaagattccgctggcctcc
gaccggccgaagattttcaacgtcgcgctcaccggctggtcgcgcaatcatgaggcgatc
tcctatcgctcgaaaggcgtcggcgagccgccgctgctgcacggcatctccgtgctgcac
gcgttgtcggacgcggttgcaagcgtcgcgaaccactgcatctgcccgcggctcgatgcg
ccggcgacgccggagcgggtgctgatggcgatcgagcggctgcgcgcccaaagcggctga
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