Afipia carboxidovorans OM4: OCA4_c08420
Help
Entry
OCA4_c08420 CDS
T01967
Symbol
groEL
Name
(GenBank) 60 kDa chaperonin protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OCA4_c08420 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oco03019
]
OCA4_c08420 (groEL)
03110 Chaperones and folding catalysts [BR:
oco03110
]
OCA4_c08420 (groEL)
03029 Mitochondrial biogenesis [BR:
oco03029
]
OCA4_c08420 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oco04147
]
OCA4_c08420 (groEL)
Enzymes [BR:
oco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
OCA4_c08420 (groEL)
Messenger RNA biogenesis [BR:
oco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
OCA4_c08420 (groEL)
Chaperones and folding catalysts [BR:
oco03110
]
Heat shock proteins
HSP60 / Chaperonin
OCA4_c08420 (groEL)
Mitochondrial biogenesis [BR:
oco03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
OCA4_c08420 (groEL)
Exosome [BR:
oco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
OCA4_c08420 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
OCA4_c08420 (groEL)
Exosomal proteins of breast cancer cells
OCA4_c08420 (groEL)
Exosomal proteins of colorectal cancer cells
OCA4_c08420 (groEL)
Exosomal proteins of bladder cancer cells
OCA4_c08420 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF8753
DHC_N2
Motif
Other DBs
NCBI-ProteinID:
AEI01989
LinkDB
All DBs
Position
complement(895601..897250)
Genome browser
AA seq
549 aa
AA seq
DB search
MAKDVKFSGDARERMLRGVDTLANAVKVTLGPKGRNVVINKSFGAPRITKDGVTVAKEIE
LEDKFENMGAQMVREVASKTNDTAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGID
IAVTAVIKDIEKRAKPVAASSEVAQVGTISANGDSTIGKMIAQAMQKVGNEGVITVEEAK
SLDTDVDIVEGMKFDRGYLSPYFVTNAEKMTAELEDAYILLHEKKLSGLQAMLPVLEAVV
QSGKPLLIIAEDIEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAVLTGGQVI
SDDLGMKLENVTLKQLGRAKKAVIDKENTTIVNGAGKKADIEARVNQIKAQIEETTSDYD
REKLQERLAKLAGGVAVIRVGGATEIEVKEKKDRVEDALNATRAAVQEGIVPGGGTALLR
AKKAVGRINNDNSDVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILDNKTETFGFDA
QNEEYVDMVAKGIIDPAKVVRTALQDAASVAGLLVTTEAMVAELPKDAAPAMPAGGGMGG
MGGMGGMGF
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagacgtaaaattctctggcgacgcgcgcgaacggatgctgcgcggcgtcgac
accctcgccaacgcggtgaaggtcacgctcggccccaagggccgcaacgtcgtcatcaac
aagagcttcggcgctccccgcatcaccaaggacggcgtcaccgtcgccaaggagatcgag
ctcgaggacaagttcgagaacatgggcgcgcagatggtgcgcgaagtcgcttccaagacc
aacgacaccgcgggtgacggcaccaccaccgcgaccgtgctcgcccaggcgatcgttcgc
gaaggcgccaaggcggttgccgccggcatgaacccgatggacctcaagcgcggcatcgac
atcgccgtcaccgccgtcatcaaggacatcgagaagcgtgcgaagccggttgcggcatcc
tcggaagtcgcccaggtcggcaccatttccgcgaacggcgacagcaccatcggcaagatg
atcgcgcaggcgatgcagaaagtcggcaacgagggcgtcatcaccgtcgaggaagcgaag
tcgctcgacaccgacgtcgatatcgtcgagggcatgaagttcgaccgcggctatctctcg
ccgtacttcgtcaccaacgccgagaagatgacggccgagctcgaggacgcctacatcctc
ttgcacgagaagaagctctccggtctgcaggccatgctgccggtgctggaagccgtcgtg
cagtccggcaagccgctcctcatcatcgccgaggacatcgagggcgaagcgctcgcgacc
ctcgtcgtcaaccgcctgcgtggcggcctcaaggttgccgccgtcaaggcgccgggcttc
ggcgatcgtcgcaaggcgatgctggaagacatcgcggtgctgaccggcggccaggtgatc
tccgacgatctcggcatgaagctcgagaacgtcacgctgaagcagctcggccgcgccaag
aaggcggtgatcgacaaggagaacaccaccatcgtcaacggcgccggcaagaaggccgac
atcgaggcgcgcgtcaaccagatcaaggcgcagatcgaggaaaccacctcggactacgac
cgtgagaagctgcaggagcgccttgccaagctcgccggcggcgtcgcggtgatccgcgtc
ggcggtgcgaccgagatcgaggtcaaggagaagaaggatcgcgtggaggacgcgctcaac
gccacccgcgccgcggtgcaggaaggcatcgttccgggcggcggcaccgctctccttcgc
gccaagaaggcagtcggccgcatcaacaacgacaactccgacgtgcaggccggcatcaac
atcgtgctgaaggcgctggaagctccgatccgccagatcgccgagaacgccggtgtcgag
ggctcgatcgttgtcggcaagatcctcgacaacaagaccgagaccttcggcttcgacgcc
cagaacgaagagtatgtcgacatggtcgccaagggcatcatcgacccggccaaggtggtt
cgcactgcgctgcaggacgcggcctccgtcgcgggcctcctcgtcaccaccgaggcgatg
gttgccgagctgccgaaggacgccgcaccggcgatgcccgccggcggtggaatgggcggc
atgggtggaatgggcggcatgggcttctga
DBGET
integrated database retrieval system
