Afipia carboxidovorans OM4: OCA4_c08900
Help
Entry
OCA4_c08900 CDS
T01967
Symbol
hisS
Name
(GenBank) histidin-tRNA ligase HisS
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OCA4_c08900 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oco01007
]
OCA4_c08900 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oco03016
]
OCA4_c08900 (hisS)
Enzymes [BR:
oco01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
OCA4_c08900 (hisS)
Amino acid related enzymes [BR:
oco01007
]
Aminoacyl-tRNA synthetase
Class II (A)
OCA4_c08900 (hisS)
Transfer RNA biogenesis [BR:
oco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
OCA4_c08900 (hisS)
Prokaryotic type
OCA4_c08900 (hisS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AEI02037
LinkDB
All DBs
Position
950742..952400
Genome browser
AA seq
552 aa
AA seq
DB search
MRDDLAAGTNRSMSDKKPKKPQKLRARLPRGLIDRTPSEIAATRAMVETIRSVYERYGFE
PVETPAMEYTDALGKFLPDQDRPNEGVFSFQDDDEQWISLRYDLTAPLARYVAEHFDTLP
KPYRSYRHGYVYRNEKPGPGRFRQFMQFDADTVGSASPAADAEMCMMAADTMEALGIAPH
QFVVRINNRKLLDGVLSSIGLGDDEAGRKLTVLRAMDKFDKFGLEGVRLLLGEGRKDESG
DFTKGAGLDERSIQLVLSVFQTGVVLTGPASTTEKKARPLDTLTFASQDGAEWHRRVTFE
SVFETLDHVRQRLGQKVQVFEDGVQELRQIADLLVASGYDDGRVQIDPSVVRGLEYYTGP
VYEVELLLETKDEKGRPVRFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVSRLQAALTLL
GKIDTKPEAGPVVVLVMDRNEIAQYQKFVATLRNAGIRAEMYLGNPKNNLGVQFKYADRR
NSPCAILQGGDEKAKGVVQIKDLILGAQVGGESEDREAFLQKQQHEAQFAVSESELIEGV
RQVLARHGINWT
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
ttgcgagacgatttggcggctggtaccaaccgctccatgtccgacaagaaaccgaaaaaa
ccgcagaaactgcgcgcgcgcctgccgcgcgggctgatcgaccgcacgccctccgagatc
gccgcgacccgcgcgatggtggagacgatccgtagcgtctatgagcgctatggcttcgag
ccggtcgagacgcctgcgatggaatataccgacgcgctcggcaagttcctccccgatcag
gaccggccgaacgagggcgtgttctcgtttcaggacgacgacgagcagtggatttcgctg
cgctacgatctcaccgcgccgctcgcgcgctacgtcgccgagcatttcgacacgctgcca
aaaccctatcgcagctatcgccacggctacgtctatcgcaacgagaagcccggccccggc
cgcttccgccagttcatgcagtttgacgccgacacggtgggctcggcctcgcctgccgcc
gacgccgagatgtgcatgatggccgccgacacgatggaagcgctgggcattgcccctcat
cagttcgtggttcgaataaacaatcgaaagctgcttgatggtgtgctgtccagcattggc
cttggcgatgacgaagccggccgcaaactcaccgtgctcagggcaatggacaagtttgac
aagttcggacttgagggcgtgcgcctattgttgggtgaagggcggaaggatgagagtgga
gatttcacgaagggcgctggactagatgaaagatccatccagcttgttctttcggtgttt
cagaccggtgttgttcttacgggcccagcaagtacaactgaaaagaaagcgcggccactc
gacactctgacgtttgcatctcaggacggcgctgaatggcaccgccgcgtaacattcgag
agcgtctttgaaacgctcgatcatgttcggcagcgtctaggccaaaaggttcaggttttt
gaggatggcgtgcaggagcttcggcaaatcgctgatctgctagttgcgtctggatatgat
gacggacgcgtacagatcgacccttccgtcgtgcgcggtctcgaatactacaccggccct
gtctacgaagttgaactgttgctcgagaccaaggacgagaagggccgcccggtgcggttc
ggctcggtcggcggtggcgggcgatacgatggattggtctcgcgctttcgcggcgagccg
gtgccggcgacaggtttctccatcggcgtttcgcggctgcaggcggcgttgacgttgctc
ggcaagatcgacaccaagcccgaagccggccccgtcgtcgtgctggtgatggatcgtaac
gagatcgcgcaatatcaaaaattcgtcgcgacactacgcaacgccggtattcgtgccgag
atgtatctcggcaatccgaagaacaatctcggcgtgcaattcaaatatgccgaccgccgc
aactcgccttgcgccatccttcagggcggcgacgaaaaggcgaagggcgtggtgcagatc
aaggatctgatcctcggcgcgcaggtcggcggcgagagtgaagatcgcgaggcgttcctg
cagaagcagcagcacgaggcgcagttcgccgtcagcgaaagcgagctgattgagggtgtg
cgccaagtgctggcgcgccacggcatcaactggacctga
DBGET
integrated database retrieval system
