Afipia carboxidovorans OM4: OCA4_c08940
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Entry
OCA4_c08940 CDS
T01967
Name
(GenBank) ribonuclease
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
oco
Afipia carboxidovorans OM4
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oco03016
]
OCA4_c08940
Enzymes [BR:
oco01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
OCA4_c08940
Transfer RNA biogenesis [BR:
oco03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
OCA4_c08940
Prokaryotic type
OCA4_c08940
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_T2
Motif
Other DBs
NCBI-ProteinID:
AEI02041
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All DBs
Position
953731..954432
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AA seq
233 aa
AA seq
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MIGYGVNFRRGLASLTAAMGVLLVASFGAAAQDHRQNAPGAFDFYVLSLSWSPSFCEAAR
ERGNTGRSTQAQCSGRPYSFVVHGLWPQYERGYPEYCKRPSPRLDRNVMRGMLDLMPAPG
LVYNEWDKHGTCSGLGARGYFETVRKARASVKIPEEYLDLASPKTVTPGEVEEAFIKANP
GLSAAAIAVRCDSRRLGEVRICMNKDLQFRACEQVNRSACRRNQIVMPPMRGG
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggtatggggtgaatttccgtcgcgggctggcctcgctcacggctgcaatgggc
gtgctgcttgtcgccagcttcggcgcggcggcgcaggaccatcggcagaatgcgccgggc
gcgtttgatttctatgtgctgtcgctgtcgtggtcgccgtcgttctgcgaggcggcgcgt
gagcgcggcaacaccgggcgcagcacgcaggcccagtgcagcgggcggccttattcgttc
gtggtgcacgggctgtggccgcaatatgagcgcggctatcccgaatattgcaagcggccc
tcgccgcggctcgatcgcaacgtcatgcgcggaatgctcgatctgatgcccgcgccgggg
ctcgtctacaacgagtgggacaagcacggcacctgctcggggcttggtgcgcgcggttat
ttcgagacggtgcgcaaggcgcgcgcctcggtgaaaattcccgaggaatatctcgatctg
gcctcgcccaagacggtcacgccgggtgaggtggaggaagctttcatcaaggccaatccg
ggcctcagcgccgctgcgatcgccgtgcgctgcgacagccgcaggcttggcgaggtgcgg
atttgcatgaacaaggatctgcaattccgcgcttgcgagcaggtcaaccgcagcgcctgc
cgccgcaatcagattgtgatgccgccgatgcgcggcgggtag
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