Afipia carboxidovorans OM4: OCA4_c09550
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Entry
OCA4_c09550 CDS
T01967
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
oco
Afipia carboxidovorans OM4
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oco03021
]
OCA4_c09550 (rpoH)
Transcription machinery [BR:
oco03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OCA4_c09550 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_11
KORA
HTH_3
HTH_7
GntR
HTH_28
HTH_23
GP3_package
HTH_Crp_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AEI02102
LinkDB
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Position
complement(1015004..1015903)
Genome browser
AA seq
299 aa
AA seq
DB search
MARTATLPILNGESGLSHYLAEIRKFPMLEPQEEYMLAKRWREHDDRDAAHKLVTSHLRL
VAKIAMGYRGYGLPISEVVSEGNVGLMQAVKRFEPEKGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKKLFFNLRKAKSKISALEDGDMHEDQVKLIAKRLGVTERDVIDMNRRL
GGDASLNAPIRDDGEPGEWQDWLVDTSPNQETIMAESEEYDHRRNALTGAMGVLNPRERR
IFEARRLAEEPMTLEDLAAEFGVSRERVRQIEVRAFEKVQAAVKSTVARQEKAALEAAY
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtacagccactctgccgattctcaacggagaatccggcctttcccattacctc
gccgaaatccgcaaattccccatgcttgaaccgcaggaggaatacatgctcgccaagcgt
tggcgcgagcatgacgaccgggatgcggcgcataagctcgtgaccagccatctgcggctc
gtggcgaagatcgccatgggttaccgcggctacggcctgccgatctccgaggtcgtctcg
gagggcaatgtcggcctgatgcaggcggtcaagcggttcgagcccgaaaagggcttccgc
ctcgccacctatgcgatgtggtggatcaaggcgtcgatccaggaatacatcctgcgttcg
tggtcgctcgtgaagatgggcaccaccgcgaaccagaagaagctgttcttcaacctgcgc
aaggcgaagagcaagatctccgcgctggaagacggcgacatgcacgaggatcaggtcaag
ctgatcgcgaagcgtctcggcgtgaccgagcgtgacgtgatcgacatgaaccgccgcctc
ggtggcgacgcctcgctcaacgcgccgatccgcgacgacggcgaacccggcgaatggcag
gactggctggtcgatacctcgcccaaccaggaaaccatcatggcggagagcgaggaatac
gatcaccgccgcaacgcgctgaccggcgccatgggcgtgctcaacccgcgcgaacgccgc
atcttcgaggcgcggcggcttgccgaagagccgatgacgctcgaggatctggccgccgag
ttcggtgtctcgcgcgaacgcgtacgccagattgaggtgcgtgccttcgagaaggtacag
gccgcggtgaagagcacggtcgcacgtcaggagaaggccgcgctggaagccgcctactga
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