Afipia carboxidovorans OM4: OCA4_c11620
Help
Entry
OCA4_c11620 CDS
T01967
Symbol
ribB
Name
(GenBank) 3,4-dihydroxy-2-butanone-4-phosphate
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco00740
Riboflavin metabolism
oco00790
Folate biosynthesis
oco01100
Metabolic pathways
oco01110
Biosynthesis of secondary metabolites
oco01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
OCA4_c11620 (ribB)
00790 Folate biosynthesis
OCA4_c11620 (ribB)
Enzymes [BR:
oco01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
OCA4_c11620 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
OCA4_c11620 (ribB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
BSH_ALG44
Motif
Other DBs
NCBI-ProteinID:
AEI02304
LinkDB
All DBs
Position
1241487..1242563
Genome browser
AA seq
358 aa
AA seq
DB search
MPNTIAEVLKAFAAGELVVVTDDDDREGEGDLIVAATLCTPEKMAFIIRHTSGIVCAPIT
VEDARRLRLDPMVANNDSNHTTAFTVSIDYKPGMTTGISAEERLACCRALANPNAGAADF
ARPGHVFPLIAREGGVLLRSGHTEAAVDLCKLAGLPPVGVISELMNDDGTVMKGEQVTSF
AAKHNLKHVTIADMIAYRQAREKLIERVSTFTVDSPIGPMQGYAYRSPFDPVYHAAFVYN
GVGDGKGVLTRIHKPNLTRDIFFGSERLAKVLERFKANGSGVLVYLRDGVVGVPVAPIDQ
HHSSEADRNRQWREIGVGAQILRDLGVTSIRHLTSAVHDYKGLSGYGIEIVGNELFES
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgccgaacactatagccgaagtcctgaaggcatttgccgcgggtgaactcgttgtcgtg
accgacgatgacgaccgtgagggcgagggcgatctgattgttgccgccaccttatgcacg
ccggagaagatggcgttcatcatccgccacacttccggtatcgtatgtgcaccgatcacc
gtcgaggatgcgcggcgcctgcggctcgatccgatggtcgcgaacaacgattccaaccac
accacggcattcacggtctccatcgactacaagcccggcatgacgaccggcatttcggcg
gaagagcggcttgcctgctgccgtgcgctcgccaacccgaatgcgggtgccgcggacttc
gcccggccgggccacgtctttccgttgatcgcgcgcgagggcggcgtgctgctgcgctcc
ggccataccgaggcggcggttgatctctgcaagctcgcgggcctgccgccggtcggcgtc
atcagcgaactgatgaacgacgacggcaccgtgatgaagggcgagcaggtgacgagcttc
gccgccaagcacaacctcaagcatgtcaccattgccgacatgatcgcctatcggcaggcg
cgcgagaaactgatcgagcgtgtctccaccttcaccgtggattcgccgatcggcccgatg
cagggctatgcctatcgttcgccgttcgatccggtctatcacgcggccttcgtctataat
ggtgtcggcgacggcaagggtgtgctaacccgcattcacaagccgaacctcacgcgcgac
atcttcttcggatcggagcgccttgcgaaggtgctggagcggttcaaggcgaacggcagc
ggcgtgctcgtctatctgcgcgacggcgtggtcggcgtgccggtggcgccgatcgatcag
catcattcctcggaggcggatcgcaatcggcaatggcgcgagatcggtgtcggcgcacag
atcctgcgtgacctcggcgtgacgtcgatccgccatctcacctccgcggtccatgactac
aagggtctgtcgggatacggcatcgagatcgtggggaacgagctgttcgagagctga
DBGET
integrated database retrieval system
