Afipia carboxidovorans OM4: OCA4_c11830
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Entry
OCA4_c11830 CDS
T01967
Name
(GenBank) putative chemotaxis sensory transducer
KO
K03406
methyl-accepting chemotaxis protein
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco02020
Two-component system
oco02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OCA4_c11830
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
OCA4_c11830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
oco02035
]
OCA4_c11830
Bacterial motility proteins [BR:
oco02035
]
Flagellar system
Chemotaxis proteins
MCPs
OCA4_c11830
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
MCPsignal
4HB_MCP_1
TarH
HAMP
Laminin_I
T7SS_ESX_EspC
DUF1664
DUF6205
Motif
Other DBs
NCBI-ProteinID:
AEI02325
LinkDB
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Position
complement(1262444..1264126)
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AA seq
560 aa
AA seq
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MLSRLSISAKLITLVSVLLLSLAALGTFSIVEMRTINASTQEIRTNWLPSIRYLGEMRTQ
AARFRAVLRDTLTEPDEAFMADIMKNLTARARDFDKAFEGYGALISSPAEREMYADLDAS
WKKFRASADEVVELAKKKDVAGARKLNAEKSVKIGRAMDGALAKIVALNDQSADAAGNQA
TEDYNIGSMIVIGALAIMILIGAGAAFLIVRDVAHSIGSVIKPMEMLAEGDLSAEIPQQS
EKTEIGKIAATLQVFKNALVAKKAADIAAAEEASAKVKRAEMVDGITREFETMIGELVTS
LSSASTEMESSAGTLTKAADVTQQLSTSAANGSRTVSESIQSTAAATEEITSSVGEIGRQ
VMESSRVAQRAVQQAEKTNASISELSAAAARIGDVVKLITAIAEQTNLLALNATIEAARA
GEAGRGFAVVASEVKALASQTAKATDEIGAQIAGMQAATDDSVVTIKEISATIDQISEIS
SAIAAAVEEQGAATQEIARNVRQAAELCSQVAVNIDEVHRGNSETGAASSQVFSAAQSLA
QESTRLEVEVQNFIGQIRAA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgctctccaggctctccatcagcgccaaactcattacgctcgtgtccgtcctcctgctt
tcgcttgcagcgctcgggacgttttcgattgtcgagatgcggacgatcaatgcgtcgacc
caggaaatccgcaccaactggctgccgagcatccgctacctcggcgagatgcgcacccag
gccgcgcgcttccgcgccgtgctgcgcgacaccctgacggagcccgatgaggccttcatg
gccgacatcatgaagaacctgactgcccgcgcccgcgacttcgacaaggcctttgaaggc
tacggcgcgctgatttcctcaccggcagagcgcgagatgtacgccgaccttgatgcttcc
tggaagaaattccgggcttcggccgacgaagtcgtcgaactcgccaagaagaaggacgtc
gccggcgcccgcaagctcaacgccgagaagtcggtgaagatcggccgcgcaatggacggc
gccctcgccaagatcgtcgccctgaatgaccagagcgccgacgccgccggcaaccaggcc
accgaggattacaacatcggctcgatgatcgtaatcggcgcgctcgccattatgatcctg
atcggtgcaggcgctgcattcctcatcgtccgcgacgtcgcccactcgatcggttcggtc
atcaagccgatggagatgctggcggagggcgatctctccgccgaaatcccgcagcagagc
gagaagaccgaaatcggcaagatcgcggccacgctgcaggttttcaagaacgcgctggtc
gccaagaaggcagccgacatcgccgctgccgaggaggcaagcgccaaggtcaagcgcgcc
gagatggtggatggcatcacccgcgagttcgaaaccatgatcggcgaactggtgacctcg
ctgtcgtcagcttccaccgaaatggaatcctccgccgggacgctgaccaaggccgcggac
gtcacccagcagctctcgacctccgccgccaacggttcgcgcacggtgtcggagagcatc
cagtcgaccgctgcggcaaccgaagagatcacctcctccgtcggcgagatcggccgtcag
gtgatggaatcgagccgcgtcgcccagcgcgccgtgcagcaggccgagaagaccaacgcc
agcatcagcgagctttcggctgccgctgcccgcatcggcgacgtcgtcaagctcatcacc
gcgattgccgagcagaccaacctgcttgccctcaacgccaccatcgaggcggcgcgcgcg
ggtgaagcgggacgcggctttgcggtcgtcgcttccgaggtgaaggccctcgcctcccag
accgcgaaggcgaccgacgagatcggcgcgcagattgccggcatgcaggccgcgaccgac
gactcggtcgtgaccatcaaggaaatcagcgcaacgatcgaccagatctcggaaatctcc
tccgcgatcgccgccgctgtcgaagaacagggcgcggcgacgcaggagattgctcgcaat
gtgcgtcaggcggccgagctctgttcgcaggtcgccgtcaacatcgacgaggtccatcgc
ggcaacagcgagaccggcgcggcctcctcgcaggtgttctcggcggcacagtcgctggca
caggaaagcacccggctcgaagtcgaggtgcagaactttatcggccagatccgcgctgcc
tga
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