Afipia carboxidovorans OM4: OCA4_c12930
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Entry
OCA4_c12930 CDS
T01967
Name
(GenBank) transcriptional regulator, IclR family
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
oco
Afipia carboxidovorans OM4
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oco03000
]
OCA4_c12930
Transcription factors [BR:
oco03000
]
Prokaryotic type
Helix-turn-helix
IclR family
OCA4_c12930
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Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR
HTH_IclR
MarR_2
HTH_20
DUF4423
HTH_5
MarR
TrmB
Diacid_rec
Motif
Other DBs
NCBI-ProteinID:
AEI02433
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Position
1382871..1383644
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AA seq
257 aa
AA seq
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MDATFLKGLRMLQALALSDRPRGVTELGRELGVTKSNAHRLLKTLVHSGFAQNNADAGKY
SATLKVWELGSHVLSRVDVKNVSGALLQVLADKTGESVHLSLLSEGSVVYIDKIDSVQPV
RAYSQIGKGAPAYCVATGKALLAHQSPEMIASLCERLEANTSRTITNAAELQRELARVRQ
LGYAVNRGEWREGVCGVAAPIRDVSHNVIAAVGISGPESRMKPAFMREQAPVVIETAELI
SRALGYSGEAAPRRKIA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgacgtttctcaaagggttgcggatgcttcaggcgctggcgctgtcggacagg
ccgcgcggcgtcaccgagcttgggcgcgaactgggcgttaccaagagcaatgcgcatcgc
ctactgaaaacgctggtgcatagcggcttcgcccagaacaacgcggatgccggcaagtac
agcgccacgctcaaagtctgggagcttggctctcatgttctgtcgcgggtggatgtcaaa
aacgtatcgggtgcgcttctacaggtgctggccgacaagaccggcgagtcggttcacctt
tctctgttgtctgaaggctccgtcgtctacatcgacaagatcgatagcgtgcagcctgtg
cgcgcctatagccagatcggcaagggcgcgccggcttattgcgtcgccaccggcaaggcg
ctgctggcgcatcagagcccggagatgatcgcttcactctgcgagcggctcgaggcaaat
acgtcgcgcacgatcaccaatgcggcggaactgcaacgcgaactcgcacgcgtgcgccaa
ctcgggtacgcggtgaaccgcggagaatggcgtgagggcgtctgcggcgttgccgcgccg
atccgcgatgtatcgcacaacgtcattgccgctgttggaatctcggggcctgaaagccgc
atgaagcccgcattcatgcgagagcaggcacctgtcgtcatcgagacggcggagcttatc
tcgcgtgcgctgggctattccggcgaagctgcgccccgccgaaagatcgcttag
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