Afipia carboxidovorans OM4: OCA4_c13020
Help
Entry
OCA4_c13020 CDS
T01967
Symbol
potB
Name
(GenBank) spermidine/putrescine transport system permease protein PotB
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OCA4_c13020 (potB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oco02000
]
OCA4_c13020 (potB)
Transporters [BR:
oco02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
OCA4_c13020 (potB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
AEI02442
LinkDB
All DBs
Position
1391984..1392862
Genome browser
AA seq
292 aa
AA seq
DB search
MSTTVENGRLSAAGNSLLRLNAGLLLVPALLFYAALFVWPLVLSTWGSFAPAGQLSLETY
AHFFGDEFYRSVLWRSMRISAITTLMTLIIGYPIAVYLSQNWRKGRSLVVFLVIAPMFVS
AVVRSYGWIIILGPNGILSSLMNSIGIPMGHLLYSEAGVIIALTHVFLPFMVIALVGSLQ
QIDPSLARAAQILGANGVSVFLRVILPLTLPGISAGSVIVFCLAASGFVTPALVGGAAVP
VMPYLVYKEGLLVLNWPFASAVALILLVATALVTAIYTFAVRDGASKRRVVR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgaccgtcgagaacggacggctctccgcggcaggaaacagcctgctgaggttg
aatgccggccttctcctggtgccggccttgctgttctacgcggccctgttcgtgtggccg
ctggtcctctcgacgtggggaagctttgctccggccgggcaactgtctcttgagacttat
gctcatttcttcggcgacgaattctatcgttccgtgctgtggcgttcgatgcgcatcagc
gcgatcacgaccctgatgacgctgatcatcggctatccgatcgcggtctatctgtcccag
aattggcgcaagggccgatcgctcgtcgtgtttcttgttatcgcgccgatgttcgtcagt
gcggtcgtgcgctcctacggctggatcatcatcctcggcccgaatggaattctcagctcg
ctgatgaacagcatcggcattccaatggggcatcttctctacagcgaagccggcgtcatc
atcgccctgacgcatgtgttcctgccattcatggtgatcgcgttggtcggctcgctgcag
cagatcgatccatcgctcgcgcgggcggctcagattctcggcgccaacggcgtcagcgtg
ttcctgcgtgtgatcctgccgttgacccttccgggaatttcggctggctccgtcatcgtt
ttttgtcttgcggcgagcggcttcgtgacgcctgcgctggtcggcggcgcggccgtgccg
gtgatgccttatcttgtctataaagaggggcttctggtgctgaactggccgtttgcgtcg
gcggtggcgttgatcctcttggtcgcgacggcactggtgacggcgatctacacattcgcg
gtccgtgacggcgccagcaagcggagggtcgtgcgatga
DBGET
integrated database retrieval system
