Afipia carboxidovorans OM4: OCA4_c13030
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Entry
OCA4_c13030 CDS
T01967
Name
(GenBank) ABC transporter permease protein
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OCA4_c13030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oco02000
]
OCA4_c13030
Transporters [BR:
oco02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
OCA4_c13030
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
AEI02443
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Position
1392859..1393656
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AA seq
265 aa
AA seq
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MMNRVLTVYVAIVSGLMIFPIAIVIVASLNSAAYLSFPPSGFSLTWYQQVMSDPIWSDAL
WLTLKIGVAVASLSTVLGVAAALGLRAVDNTLSGVLQTFFLSPLMLPTVLIGLALMQFYQ
SLGIKASVLTVTLGQLLIACPYVIRLVLASFNGIDPRLERAASILGANPVRVFWHVTFPL
IRHAVLAGFLFSFIVSLDDVNIALFLSDTHTTPLPVQLFSYIEQNADSLGAAAASLLVLL
ACLAVFICDRIVGIEWLFGAKQRSS
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaccgcgtcctcacggtctatgtcgcgatcgtctcaggcctgatgatctttccg
atcgccatcgtgattgtggcatcgctcaactccgcggcttatctgtcgtttccgccatca
ggtttcagtctcacctggtatcagcaggtgatgtcggacccgatctggagcgacgcgctg
tggctgaccttgaagatcggcgttgcggtggcatcgctctcgaccgtgctgggcgttgcg
gccgcgctcgggctgcgcgccgtggacaatacgctctccggcgtcctgcagacttttttt
ctctcgccgctgatgctgccgacggtgttgatcggcttggcgttgatgcagttctaccag
tcgctcggtatcaaggcgtcggtcctgaccgtcacgctcggccagcttctgatcgcatgt
ccctatgtgatccggttggtgctggcgagcttcaacggcatcgatccacggctcgagcgc
gcggcgtcgatcttaggtgccaaccccgtccgggtgttctggcatgtgacgtttccgctg
atacgtcacgcggtgctggcgggcttcttgttcagcttcatcgtttcgctcgacgacgtg
aatatcgcgctcttcctctccgatacgcacaccacgccgctgccggtgcagttgttcagc
tacattgagcagaacgcggactcgcttggcgccgccgcagcgtctttgctggttctgctc
gcatgccttgcggtcttcatctgcgaccggatcgtcgggatcgagtggctgttcggcgcc
aagcagcgctcaagctga
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