Afipia carboxidovorans OM4: OCA4_c13360
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Entry
OCA4_c13360 CDS
T01967
Symbol
sucD2
Name
(GenBank) succinyl-CoA ligase [ADP-forming] subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco00020
Citrate cycle (TCA cycle)
oco00640
Propanoate metabolism
oco00660
C5-Branched dibasic acid metabolism
oco00720
Other carbon fixation pathways
oco01100
Metabolic pathways
oco01110
Biosynthesis of secondary metabolites
oco01120
Microbial metabolism in diverse environments
oco01200
Carbon metabolism
Module
oco_M00009
Citrate cycle (TCA cycle, Krebs cycle)
oco_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
OCA4_c13360 (sucD2)
00640 Propanoate metabolism
OCA4_c13360 (sucD2)
00660 C5-Branched dibasic acid metabolism
OCA4_c13360 (sucD2)
09102 Energy metabolism
00720 Other carbon fixation pathways
OCA4_c13360 (sucD2)
Enzymes [BR:
oco01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
OCA4_c13360 (sucD2)
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Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AEI02476
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All DBs
Position
1440944..1441834
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AA seq
296 aa
AA seq
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MIYRRGQKVLVQGMTGKQGTFWSERMREMGTDVAAGVNPKRAGETYLGVPIYGSAVEATK
ETPCDVSVIFIPPSMAKAAIIDAIDAGIGTIVTLTEHIPAHDVLEIFARLRLSKSRIIGP
NTAGIVTPGEGFVGIMPGHNPNIFKPGRVGVISRSGSLGTLMCLNLTRADLGQSAFIGIG
GDPIIGTTTRDALIELDRDAKTDAVVLVGEIGGAMEEEAAEYARTMKKPIVSFIAGRSSP
PDKKMGHAGAIVTGGRGGYDSKRAALEKAGIRVANTPAEVVTLLKQVDTAKVSAVG
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgatttatcgtcgcggacaaaaagttctcgttcagggcatgaccggaaagcagggcacg
ttctggtcggagcggatgcgggaaatgggcacggatgtcgccgcgggcgtcaatccgaag
cgtgcgggcgagacgtatcttggcgtgccgatctatggatcggcggtcgaggccaccaag
gagacgccgtgcgatgtctcggtgatcttcattccgccgtcgatggcgaaggccgcgatc
atcgacgcgatcgatgcgggcatcggcaccatcgtcacgctgaccgagcacattccggcg
cacgacgttctggaaatctttgcgcgcctgcggctctcgaagagccggatcatcggcccc
aacacggccggcatcgtgacgccgggcgaaggtttcgtcggcatcatgccgggacataac
cccaacatcttcaagcccggccgcgtcggcgtgatttcacgcagcggcagcctcggcacc
ctgatgtgcctgaacctgacgcgtgccgaccttggccagtcggcgttcatcggtatcggt
ggcgatccgatcatcggtaccacgacgcgcgatgcgttgatcgaactcgatcgcgatgcc
aagaccgacgccgtcgtgctggtcggcgagatcggcggcgcgatggaagaagaagcggcc
gaatatgcccgaaccatgaagaagccgatcgtctccttcatcgcgggccgctcctcgccg
cccgacaagaagatgggccatgccggcgcgatcgtcaccggcgggcgcggtggctatgac
tccaagcgcgccgcgctcgagaaagcgggaattcgggtggcgaatacgccggctgaagtg
gtgacgcttttgaagcaggtcgatactgccaaagtgtcggcggtgggctga
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