Afipia carboxidovorans OM4: OCA4_c15690
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Entry
OCA4_c15690 CDS
T01967
Symbol
mdtB1
Name
(GenBank) multidrug resistance protein MdtB
KO
K07788
multidrug efflux pump
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OCA4_c15690 (mdtB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oco02000
]
OCA4_c15690 (mdtB1)
Transporters [BR:
oco02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
OCA4_c15690 (mdtB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Man-6-P_recep
UBA_RAD5A
DUF5693
Motif
Other DBs
NCBI-ProteinID:
AEI02708
LinkDB
All DBs
Position
1697815..1700961
Genome browser
AA seq
1048 aa
AA seq
DB search
MGSGFSAPFIRFPIATSLLMVGVLFVGLVAYPALPIAPLPQVDFPTIQVSASLPGASPET
MASSVAQPLERQFAQIPGVAQLTSTSSLGSTSITIQFDLNRAIDGAANDVQAAINAASGQ
LPKNLPSPPTYRKVNPADAPIMILSATSDTMPLIEVNDAIDSKLAQQLSQITGVAQVLIG
GQQKPAIRVQIDPAKLVAKGLGLEDVRLQLAQTTVDSPKGNIDGKTRSYTIYANDQLPSS
KDWNDVIIAYRNGGPLRVRDIGQAIAGPEDMKQAAWANGKRGVFLVVFKQPGANVIETVD
KIKAQLPRLEKGLPPAVNVTIMSDRTQTIRAAVEDVQFTLLLTIALVVMVIFLFLRNFWA
TVIPSITVPLALLGACALMWVVGYTLDNLSLMALTIAVGFVVDDAIVMLENISRYVEKGE
DPYEAALKGAREIGFTIVSISVSLVAVLIPLLLMGGIIGRLFREFAVTLAMTIFVSMIVS
LTLTPMMASRFLQPHREGQQHGKLYQWSERMFDGMLHAYERGLDLVMRWRFTTLMVFFAT
VALSVILFLAIPKGFFPQQDNGLLTGASQASQDISFAEMKRKQEELGKIVLDDPDVASVA
MAIGGGGSALNTGRLYITLKPRSERTALAPQIIARIRAKAEKVEGARLFLQASQDVRLGG
RATRTQFEYTLQDANLDELNEWAPKILAKMETLPQLRDVATDQQTKGTTLTLTIDRDTAS
RYGISPQLIDDTLYDAFGQRQIAQYFTQLNTYRVVMEILPELQGDLETLQKIYIKSPNTG
EQVPLSTFVRWTTDPVRPLSISHQGQFPAITISFNLAQGVALGQATDAVQKAMEELGAPP
TLNGSFQGTAQAFQQSLGTIPLLIFAALIVVYLILGILYESYIHPLTILSTLPSAGVGAL
AILMLFGFDFSLIALIGIVLLIGIVKKNGIMMVDFAIVAEREGLSPEESIRKAALLRFRP
IMMTTMAALLGGVPLMLGHGTGSEIRQPLGYAMVGGLLVSQMLTLFTTPVIYLYLDRVSN
WVSGLGRRPPPSDRGHPQPQDAVSQAAE
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgggctcaggcttctcggctcctttcatccgcttccccatcgcgacatcgctgttgatg
gtgggcgtgttgttcgtcggccttgtcgcctatccggcgctgccgattgcaccgctgccg
caggtcgacttccccacgatccaggtatcggcgagtctgccgggtgcgagccctgaaacc
atggcgtcctcggtcgcgcagccgctcgagcggcagttcgcgcagatcccgggcgtcgcc
cagcttacctcgacaagttcgctcggctcgacctcgatcaccatccagttcgatctcaac
cgcgcgatcgatggtgcggcaaacgacgtgcaggcggcgatcaacgccgcaagcggacag
ttgccgaagaacctgccgagcccgccgacctatcgcaaggtgaacccggccgacgcgccg
atcatgatcctgtcggcgacgtccgacaccatgccgctgatcgaggtcaatgacgcgatc
gacagcaagctcgcccagcagctcagccagatcactggcgtcgcgcaggtgctgatcggt
ggccagcagaagcctgcgatccgtgtgcagatcgatccggcaaagcttgtcgccaaaggg
ctcgggctcgaggacgtgcgcctgcagcttgcgcaaacgactgtcgacagtccgaagggc
aatatcgacggcaagacccgcagctatacgatctatgccaatgaccagttgccgtcctcg
aaggactggaacgacgtcatcatcgcctatcgcaacggtggaccgttgcgggtgcgcgat
atcgggcaggcgatagccggccccgaggacatgaagcaggcagcatgggcgaacggcaaa
cgcggcgtgttccttgtcgtgttcaagcagcccggcgccaacgtcatcgagacggtcgac
aagatcaaggcgcaactgccgcggctggagaagggcctgccgcccgcggtcaatgtcacg
atcatgagcgaccggacccagacgatccgcgccgcggtcgaggacgtgcagttcacgctg
ctcctcaccatcgcgctggtggtgatggtgatcttcctgttcctgcgcaacttctgggcg
acggtgatcccgagcatcaccgtgccgctggcgttgcttggcgcctgcgcgctgatgtgg
gtcgtgggctatacgctcgacaatctgtcgctgatggcgctgacgattgcagtcggcttc
gtggtcgacgacgccatcgtgatgctggagaacatctcgcgctatgtcgaaaagggggag
gacccctatgaggcggcgctgaaaggcgcgcgtgaaatcggcttcaccatcgtgtcgatc
agcgtctcgctggtcgcggtgctgattccactgttgctgatgggtggcatcatcggccgt
ctgttccgcgaattcgccgtcacactcgcgatgacgatcttcgtctccatgatcgtgtcg
ctgacgctgacgccgatgatggcgtcgcgcttcctgcagccgcatcgcgaaggtcagcag
cacggcaagctctaccagtggagcgagcgcatgttcgacggcatgctgcacgcctatgag
cgcgggctcgacctcgtgatgcgctggcgtttcacgacgctgatggtgttcttcgcgacc
gtcgcgctgtcggtgatcctgttcctggcgatcccgaagggcttcttcccgcagcaggac
aacggccttctcaccggcgcctcgcaggcgtcgcaggatatttccttcgccgagatgaag
cgcaagcaggaagagctcggcaagatcgtgcttgacgatcccgatgtcgcaagcgtggcg
atggcgatcggcgggggcggcagcgcgctcaataccggacgtctctacatcacgctgaag
ccgcgcagcgagcgcaccgcgctggcaccgcagatcatcgcgcgcatccgcgccaaggcg
gagaaggtcgagggtgcgcgattgttcctgcaggcgtcgcaggacgtgcggctcggcggc
cgcgccacgcgcacacagttcgagtacacgctgcaggatgccaacctcgacgaattgaac
gagtgggcgccgaagattctggcgaagatggagacgctgccgcaactgcgcgacgttgcg
accgaccagcagaccaagggcacgacgctgacactgacgatcgatcgcgataccgcgtca
cgttacggcatctcgccgcaactcatcgacgatacgctctacgatgcattcggccagcgc
cagatcgcgcagtatttcacccaactcaacacctatcgcgtggtgatggaaatcctgccg
gagttacagggcgatctcgagacgctgcagaagatttacatcaagtcgcccaacaccggc
gagcaggtgccgctctcgaccttcgtgcgctggacgacggacccggtgcggccgctctcg
atcagccatcagggccagttcccggcgatcaccatcagcttcaacctcgcgcagggcgtg
gcgctcgggcaggcgaccgacgccgtgcagaaggcgatggaagaactcggcgcgccgccg
acgctcaacggaagcttccagggcaccgcgcaggcgttccagcaatcgctcggcaccatt
ccgctgttgatctttgccgcgctgatcgtagtgtatctgatcctcggcatcctctacgag
agctacatccacccgctcacgattctctcgacgctgccgtcggcgggcgtcggtgcgctc
gcgatcctgatgctgttcggattcgatttcagcctgatcgcgctgatcggcatcgtgctc
ctgatcggcatcgtgaagaagaacggcatcatgatggtcgacttcgcgatcgtcgccgag
cgtgagggactgtcgccggaggagtcgatccgcaaggcggcgctgctgcgcttccgcccg
atcatgatgacgacgatggcggcgctgcttggcggcgtgccgctgatgctcggtcacggc
accggctcggaaatccgccagccgctcggctacgccatggtcggcggcttgctcgtcagc
cagatgctgacgctgttcacgacgccggtgatctatctctatctcgaccgcgtctcgaac
tgggtctcgggactgggccggcgcccgccgccgtccgaccgtggccatccgcagccgcag
gacgcggtgtcacaagccgcggagtag
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