Afipia carboxidovorans OM4: OCA4_c15840
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Entry
OCA4_c15840 CDS
T01967
Name
(GenBank) tRNA/rRNA cytosine-C5-methylase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
oco
Afipia carboxidovorans OM4
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oco03009
]
OCA4_c15840
Enzymes [BR:
oco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
OCA4_c15840
Ribosome biogenesis [BR:
oco03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
OCA4_c15840
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltransf_31
FtsJ
Methyltransf_25
Ubie_methyltran
MTS
Cons_hypoth95
Methyltransf_5
PrmA
Methyltransf_24
Methyltransf_15
PCMT
Methyltr_RsmF_N
Motif
Other DBs
NCBI-ProteinID:
AEI02722
LinkDB
All DBs
Position
1718090..1719391
Genome browser
AA seq
433 aa
AA seq
DB search
MTPAARLSAAIDVLGAIEAERIPAQNALKSWGTAHRFAGSGDRAAIAGLVFDALRRHASS
AYLMDDDSARARLLGALKLERGLDVEAIASLCNGERFAPVPLSDAERNALATRTLADAPS
DIAGDYPTWLDPHFAEAFGDDRVKEAAAMASRAPLDLRVNTLRAKREKAQAALSHLGATP
TPWSPLGLRIVLGADARNPGVHAEEIFLKGGVEVQDEGSQLAALFTQAKPGEQVVDLCAG
AGGKTLALAAMMQGKGRLLATDRDKRQLAPIHQRLSRAGVHNAEIRSPRGAEDVLADASG
KADLVVVDAPCTGTGTWRRNPDAKWRMRPGALEIRLKDQVEVLTRAASLVKPGGRLAYIT
CSVLPQENSGQIEAFLAREPGFTVMPPAEVIAALGERAAAFREAVRLSPQGLLMTPLRTG
TDGFFVSLLRKAG
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccgccgcgcggctctccgccgccatcgacgttctcggcgccatcgaggccgaa
cgcatccccgcccagaacgcactgaaatcatggggcaccgcgcaccgctttgccggctcg
ggcgaccgtgccgcgattgcggggctggtgttcgacgcgctgcgccgccacgcgtcgagc
gcctatttgatggatgacgacagcgcccgcgcgcggctgctcggggcactcaagctcgaa
cgtggtctcgacgtcgaagccattgctagcctgtgcaatggtgagcgctttgcgcctgtg
ccgttgtcggatgccgagcgcaatgcgcttgcgacccgcacacttgccgatgcgccatcc
gatatcgcgggagattaccccacctggctcgatccgcattttgcggaagcctttggcgat
gatcgcgtcaaggaagcggccgcgatggcgagccgcgcgccgctcgacctgcgggtcaac
acgcttcgggccaagcgggagaaggcgcaggccgcactctcgcaccttggagccacgccg
acgccatggtcgccgctcggccttcgcatcgtgctcggggcggatgcgcgcaaccccggc
gttcatgccgaggagattttccttaaaggtggcgttgaagtgcaggatgaaggatcgcag
ctcgcggccttgttcacgcaggcaaaacccggcgagcaggtggtcgatctttgcgcgggc
gcgggcggcaaaacgctggcgctcgcggcgatgatgcagggtaagggccggctgctcgcg
accgatcgcgacaagcgccagcttgcgccgatccaccagcggctgtcgcgcgcaggggtc
cacaatgccgaaatccgctccccgcgcggggcggaggacgtgctggccgatgcttccggg
aaagccgatctcgtggtggtggacgcgccctgtaccggcaccgggacgtggcggcgcaac
cccgacgcgaaatggcggatgcggcccggcgcgctggaaatccggctcaaggatcaggtc
gaggtgctcacgcgcgcagcctcgctggtcaagcccggcgggcggctcgcctacatcacc
tgttcggtgctgccgcaggagaacagcggccagatcgaggccttcctcgcgcgcgagccg
ggctttaccgtgatgccgccggccgaggtgatcgcggcgctgggcgagcgggcggccgct
ttcagggaagccgtgcgcctgtcgccgcaggggcttctgatgaccccgctgcgcaccggc
accgacgggtttttcgtgtcgctcctgcgcaaggcgggatag
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