KEGG   Afipia carboxidovorans OM4: OCA4_c16200
Entry
OCA4_c16200       CDS       T01967                                 
Symbol
trbD
Name
(GenBank) putative conjugal transfer protein TrbD
  KO
K20529  type IV secretion system protein TrbD
Organism
oco  Afipia carboxidovorans OM4
Pathway
oco02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:oco00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    OCA4_c16200 (trbD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:oco02044]
    OCA4_c16200 (trbD)
Secretion system [BR:oco02044]
 Type IV secretion system
  Trb secretion system protein
   OCA4_c16200 (trbD)
SSDB
Motif
Pfam: VirB3
Other DBs
NCBI-ProteinID: AEI02758
LinkDB
Position
1755170..1755433
AA seq 87 aa
MEEDVRGFFAPVHRALTEPILLGGAPRTVAIANGTLAGAVGLGLRLWIAGLVIWAIGHFA
AIWAAKRDAQFVDVGRRHLRYPAHMDV
NT seq 264 nt   +upstreamnt  +downstreamnt
atggaggaagacgtccgcggcttcttcgcgccggtgcatcgcgcgctcaccgagccgatc
ctgctcggcggtgcgccgcgcacggtcgccatcgccaacggcacgctcgcaggcgcggtc
gggctcggcctgcgcctgtggatcgcgggcctcgtcatctgggcgatcgggcatttcgcc
gcgatatgggcggcgaagcgtgacgcgcagttcgtcgacgtcggccgccggcacctgcgt
tacccggcgcacatggacgtgtga

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