Afipia carboxidovorans OM4: OCA4_c16660
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Entry
OCA4_c16660 CDS
T01967
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
oco
Afipia carboxidovorans OM4
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oco03400
]
OCA4_c16660 (radA)
DNA repair and recombination proteins [BR:
oco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OCA4_c16660 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
AAA_16
DnaB_C
AAA_22
Lon_C
AAA_30
AAA_24
AAA
SLFN-g3_helicase
RecA
NACHT
MCM
MeaB
nSTAND3
NTPase_1
NPHP3_N
AAA_5
ATPase_2
AAA_14
AAA_19
GvpD_bR2
ABC_tran
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AEI02804
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Position
complement(1802116..1803528)
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AA seq
470 aa
AA seq
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MAKHVPSFVCQNCGSAYTKWQGKCEGCGEWNTLSEEDSIAATAMPASIRPKRKGRLFTLE
SLTGESQQAPRLPSGMAELDRVTGGGFVRGSVLLVGGDPGIGKSTLLTQAASLLARAGHR
AVYISGEEAVAQVRLRAARLGLADAAVQLAAETSVEDIIATLSEGTPPRLVVIDSIQTMW
TDTVESAPGTVTQVRASAQALIRFAKKSGAALILVGHVTKDGQIAGPRVVEHMVDAVLSF
EGEGSQQFRILRSVKNRFGPTDEIGVFEMTGLGLREVTNPSELFLSERDLGSPGTAVFAG
IEGTRPVLVELQALVAPTSLGTPRRAVVGWDPSRLSMVLAVLEAHCGIKLSGHDVYLNVA
GGLRIQEPAADLAAAAALVSSLANAPLPVDAVYFGEISLSGAVRPVAQSSARLKEAAKLG
FARAVLPEAPRGETGASDGGLSLNSVGSLTSLVAEIAARSEKRLRPAAQA
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacacgtcccctctttcgtctgtcaaaactgcggttccgcctacaccaagtgg
cagggcaagtgcgaaggctgcggcgagtggaacacgctctccgaggaggattcgattgcg
gccacggcgatgcccgcaagcatccgtccgaagcgcaagggccgcctgttcacactggaa
tcgctgaccggagaatcgcagcaggccccgcgtctgccttccggcatggcggaactcgac
cgcgtcaccggcggtggcttcgtgcgcggctcggtgctgctcgtcggcggcgatcccggc
atcggcaaatcgacgctgctcacccaggcggcgagccttctcgcccgcgcgggccatcgc
gccgtctacatctccggcgaggaagccgtggcgcaggtgcggttgcgcgccgcgcggctt
ggccttgcggatgccgccgtgcagcttgcggccgagacatcggttgaagacatcatcgca
accctttcagaaggcacgcctccccgcctcgtcgtgatcgactcgatccagaccatgtgg
accgacaccgtcgaatccgcgcccggtacggtgacgcaggtccgcgcctcggcacaggcg
ctcattcgcttcgccaagaagtccggcgcggcactcattctcgtcggccatgtcaccaag
gatggccagatcgcgggcccccgcgtggtcgagcacatggtcgatgccgtgctttcattt
gaaggcgaaggctcgcagcagttccgcatcctgcgctcggtgaagaaccgtttcggcccg
accgacgagatcggtgtgttcgagatgaccgggcttggcctgcgcgaggtcaccaacccg
tccgaactctttctttccgagcgcgacctcggcagccccggcaccgccgtattcgcaggc
atcgagggcacccgccccgtgctggtcgagttgcaggcgctcgtcgcgccgacctcgctc
ggcacaccccgtcgcgccgtggtcggctgggaccccagccggttatcgatggtgctcgcc
gtgctggaagctcattgcggcatcaagctctcgggccacgacgtctatctcaacgtcgcg
ggcggcctgcgcattcaggagcctgccgcggacttggctgctgctgccgcgctcgtctcc
tcgctcgccaacgcgccgctgccggtcgatgccgtctatttcggcgaaatctcactatcg
ggtgccgtgcggccggtagcgcagtcctccgcccgactgaaagaggctgcgaaactcggc
ttcgcccgcgccgtgctgccggaggcgccgcgcggcgagaccggcgcgtccgatggcggg
ctcagccttaacagcgtcggttcgctcacctcgctggtcgccgaaatcgcggcacgcagc
gagaaacggctgcgccccgccgcgcaagcgtga
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