Afipia carboxidovorans OM4: OCA4_c17380
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Entry
OCA4_c17380 CDS
T01967
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase KdsA
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco00541
Biosynthesis of various nucleotide sugars
oco01100
Metabolic pathways
oco01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
OCA4_c17380 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
oco01005
]
OCA4_c17380 (kdsA)
Enzymes [BR:
oco01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
OCA4_c17380 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
oco01005
]
Lipid A
OCA4_c17380 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
AEI02876
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Position
1886455..1887294
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AA seq
279 aa
AA seq
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MVSASKTVSAGNVTFGNDLPLAVIAGPCQLESRAHALEVAGALKEIAARLKIGLVFKTSF
DKANRTSASAERGIGLAKALPIFAEIRDSLGLPVLTDVHEVEQCAEVAQAVDVLQIPAFL
CRQTDLLLAAAATGKVVNVKKGQFLAPWDMQNVVSKITNGGNANVLVTERGASFGYNTLV
SDMRALPIMARTTGAPVVFDATHSVQQPGGKGTSSGGEREFVPVLARAAVAVGVAGVFIE
THPDPDHAPSDGPNMVPLKDFEGLLQTLMAFDAVAKAGR
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
ttggtttcagcctcaaaaaccgtatcggccggcaacgtcaccttcggcaacgacctgccg
ctcgcggtgattgccgggccgtgccagttggaaagccgcgcgcacgcgcttgaggtggcc
ggtgctctgaaggagatcgcggcgcggctcaagattggcctcgtcttcaagacctcgttc
gacaaggcgaaccgcaccagtgcctccgccgagcgcggcatcgggctcgcgaaagcactg
ccgatcttcgccgaaatccgcgacagcctcggcctgccggtgctgaccgacgtgcatgaa
gtggagcaatgcgcggaggtggcgcaggcggtcgacgtgttgcagatcccggcgttcctg
tgccggcagaccgaccttctgctggcggccgctgcgaccggcaaggtggtcaacgtcaag
aaggggcagtttctggcgccgtgggacatgcagaacgtcgtctcgaagatcacgaacggc
ggcaacgccaacgtgctggtgacggagcgcggcgcttcgttcggctacaacacgctcgtc
tccgacatgcgcgcgctgccgatcatggcgcgcaccaccggcgcgccggtagttttcgat
gcgacccattcggtgcagcagccgggcggcaagggcacctcgtccggcggcgagcgcgag
tttgtgccggtgctggcacgcgcggctgttgcggtcggcgtcgcgggtgtgttcatcgag
acccatcccgatcccgaccatgcgccgtccgacggaccgaacatggtgccactcaaggac
ttcgagggacttcttcagaccctgatggcattcgacgcggtggcaaaggcggggcggtaa
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