Afipia carboxidovorans OM4: OCA4_c17680
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Entry
OCA4_c17680 CDS
T01967
Symbol
serS
Name
(GenBank) serine-tRNA ligase SerS
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OCA4_c17680 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oco01007
]
OCA4_c17680 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oco03016
]
OCA4_c17680 (serS)
Enzymes [BR:
oco01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
OCA4_c17680 (serS)
Amino acid related enzymes [BR:
oco01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
OCA4_c17680 (serS)
Transfer RNA biogenesis [BR:
oco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
OCA4_c17680 (serS)
Prokaryotic type
OCA4_c17680 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
PI3K_P85_iSH2
OVT1
Motif
Other DBs
NCBI-ProteinID:
AEI02906
LinkDB
All DBs
Position
1917106..1918425
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AA seq
439 aa
AA seq
DB search
MHDIRWIRDNPEAFDAALGRRGLEPQAAALIALDEKRRGAIAAFEQAQARRNAASKEIGE
AKKAKENARADALMAEVGELKTKLPEMDAAAKRLEEDLRKELAQIPNLPLAEVPEGADEH
GNVQHHVYGEPRSYAFKPKEHVALGEGLGFMDFERAAKLSGARFVVLKSGLARLERAIGQ
FFLDVHTGEHGYTEVNPPLLVRDDAMFGTAQLPKFREDQFAAGSLDAEGQGYWLIPTAEV
PLTNLVRESILDEKELPMRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPDE
SRNEHERMLSCAEEVLKRLGLHYRVMTLCTGDMGFASQKTYDIEVWMPGQISSQGEGGMY
REISSCSVCGDFQARRMDARYRGPDNKPHFVHTLNGSGTAVGRALIAVMETYQQEDGSIA
VPDVLQPYMGGLKVIERDR
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacattcgctggattcgcgacaacccggaggctttcgacgccgcgctgggccgg
cgcggacttgagcctcaggcggccgcgctgatcgcgctcgacgagaagcggcgcggtgcg
attgccgctttcgagcaggcgcaggcgcgacgcaacgcagcctcgaaggaaatcggggaa
gccaagaaggcgaaggagaacgctcgcgccgatgcgctgatggcggaagtgggtgagctc
aagaccaagctgccggagatggacgcggcagcaaaaaggcttgaggaagatctgcgcaag
gagcttgcacagattccgaaccttccgctcgccgaagtaccggagggcgccgacgagcac
ggcaacgtgcagcatcacgtctatggtgagccgcgcagctatgcgttcaagccgaaggag
catgtcgcgctcggcgaaggtctcggcttcatggatttcgaacgggccgcgaaactctcc
ggggcgcgctttgtcgtgctgaagagcggactggcgcggctcgagcgcgccatcggtcaa
tttttcctcgacgtgcataccggcgaacacggctacactgaagtgaacccgccgctgctg
gtgcgcgacgatgcgatgtttggcaccgcgcagttgccgaagtttcgggaagatcaattc
gcggccggatcgctggacgccgaagggcaaggctattggctcattcccaccgctgaggtc
ccgctgacgaaccttgtgcgtgaatcgatcctcgacgagaaagaattgccgatgcgcttg
accgcgctgacgccgtgcttccgtgcggaagcaggtgcagccgggcgcgatacgcgtggc
atgatccgccagcatcagttcaccaaggtcgaactcgtttcgatcacgacgcctgatgaa
tccaggaacgagcacgagcgcatgctctcctgcgcggaagaagtgctgaagcggctcggc
ctgcattatcgcgtgatgacgctgtgcaccggcgatatgggcttcgcgtcacaaaagacc
tacgacatcgaagtatggatgccgggacaaatatcgagtcagggcgaaggcggtatgtac
cgcgaaatttcatcgtgctcagtgtgcggcgacttccaggcgcggcgcatggatgcgcgc
tatcgcggacccgacaacaagccgcacttcgtgcatacgttaaacggttcgggtacggcg
gttggccgcgcgctgatcgcggtgatggaaacctatcagcaggaagacgggtcgatcgcg
gtgccggatgtgctgcagccttacatgggcggtctgaaagtgattgagcgggaccgctga
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