Afipia carboxidovorans OM4: OCA4_c19020
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Entry
OCA4_c19020 CDS
T01967
Name
(GenBank) putative DNA polymerase III subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco03030
DNA replication
oco03430
Mismatch repair
oco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OCA4_c19020
03430 Mismatch repair
OCA4_c19020
03440 Homologous recombination
OCA4_c19020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oco03032
]
OCA4_c19020
03400 DNA repair and recombination proteins [BR:
oco03400
]
OCA4_c19020
Enzymes [BR:
oco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OCA4_c19020
DNA replication proteins [BR:
oco03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OCA4_c19020
DNA repair and recombination proteins [BR:
oco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OCA4_c19020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AEI03038
LinkDB
All DBs
Position
2050876..2051919
Genome browser
AA seq
347 aa
AA seq
DB search
MSPRNQSAETIAAPHPRETISLYGHAAAEAALLTAYKSGHIPHAWLIGGVQGIGKATLAY
RMARFVLANPDPASAKVQEAVSLQVDAPYPVARQIAAGSHGGMLTLERSANDKGVMRSVI
TVDESRETISFFGSTAAAEGWRVCIVDTVDELNANASNALLKILEEPPARSLFLLVSNMP
SRVLATIQSRCRKLMLRSLATEEVIAAAAEALQIDPSDQALREAAETAEGSVAHTLTLMG
GEALGLQQRTTALLDILPQLDHRALHALGDALPLNDRAALRTVIETIERWLSARLRDDEL
QSDLPRLARFAEVWEKMGKAARDTESFNLERKPLVFSVFGWLAEAAA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgcgaaaccaatcggccgaaacgatcgccgcaccgcatccgcgcgagacgata
tctctttatggtcatgcggcagcagaggctgcgctgctcaccgcctacaagagcgggcac
attccgcatgcctggctgatcggcggcgtgcagggcatcggcaaggcgacgctggcctat
cgcatggcgcgcttcgtcctcgccaatcccgatcccgcgtccgccaaagtgcaggaggcc
gtctcgctgcaggtcgatgccccgtatcccgtggcgcggcagatcgcggccggaagccat
ggcggcatgctgacgctcgagcgcagcgccaacgacaagggcgtgatgcgcagcgtcatc
acggttgacgagtcacgcgagacgatttcgtttttcggctcgacggcggcggcggaaggc
tggcgcgtctgcatcgtcgacaccgtcgatgagctcaatgccaacgcctccaacgcgctc
ctgaaaatcctcgaagagccgcccgcgcgctcgctgtttctccttgtcagcaacatgcct
tcgcgcgtgctcgccacgatccaatcgcgttgccgcaaactgatgctgcgctcgctcgcg
acggaagaggtgatcgccgccgccgcggaagcgctgcagatcgatccatccgatcaggcg
ttgcgcgaagcggcggagacggcggagggcagtgttgcccacacgctgacgctgatgggc
ggcgaggcgctcgggctgcagcagcgcacaaccgctctcctcgacatcctgccgcaactc
gaccatcgcgctttgcatgcactcggcgatgcgctgccgctcaacgatcgtgcggcgcta
cgcactgtgatcgagacgatcgaacgctggctgtcggcgcggttgcgggacgatgaattg
cagtcggatttgccgcgccttgcgcgctttgccgaggtatgggaaaagatgggcaaggcc
gcccgcgatacggaatcattcaatttggagcgaaaaccgctggtgttttcggtatttggg
tggctcgccgaagccgccgcctga
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