Afipia carboxidovorans OM4: OCA4_c20490
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Entry
OCA4_c20490 CDS
T01967
Name
(GenBank) putative DNA uptake protein
Organism
oco
Afipia carboxidovorans OM4
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Competence
DUF4131
Motif
Other DBs
NCBI-ProteinID:
AEI03180
LinkDB
All DBs
Position
complement(2228326..2230593)
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AA seq
755 aa
AA seq
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MTDGGWEQKRSRAGRAIAWPPRETEATSAVFPLSPWRSFLETISGWMRAEAGPGRLLPWI
PIAFGAGIAVYFTAAREPVAAIVVPVAAGACVVAFLVRRHALFPILALFAAMLAGFATAT
LKTARVAHPVLLAPVGMATLEGFVETHEERERTDRFVLRITKIDARGAPHLERVRLSVRK
GTAPAVGQYVALKARLLPPLRPLRPGGYDFARDMYFQGLGASGFVLGAIKLTDAPQEGDL
MLRYWTAVQGMRDGVDARIRTVLSGDERAIATALLTGRRDAISAPVNDALFVSGLGHVLS
ISGYHMAVVAGVVFFAIRALLALSVTLNTRCPIKKWAAAAALVAAAFYLLLSGAEVATQR
AFAMTALVLIAVMVDRRAITFRTLALAAMLVLLIAPEALVHPSFQMSFAATLALVMLAQN
GLPGWFTDNDGALGRFAAWGGRELFVLAAASFVAGLATTPYAAFHFHRIAPYGVIANLVA
MPVVSVLVMPAGLLGIVAIPFGLDSLFWQLMDVGIDWMIAVSQWVVALPGAFGRVHAFGV
GSLLVISAGIIVLGLLRTPLRWAGAALIGGGILLAAQATPPDVLIARDAASVAVRGRDGQ
LRIMPTAKNAFVAREWLAADADARVTTDPSLTLGVSCDATGCVVEGKGGDLVALAHWPEA
LTDDCARAKIIVTSHAVPADCAARIFDRDSLRQLGGMALVRTDDGYRMIAGEPQGLDRPW
APAIAVEVSGVHRRAEQAAIPVDATPAEADRQADD
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgggggctgggagcagaagcggtcgcgcgcgggcagggccatcgcatggccg
ccgcgcgagacggaggcgacgtctgccgtttttcctctcagcccgtggcgctctttcctt
gagacaatctctggctggatgcgcgccgaggctggccccggacggctgctgccctggatt
ccgatcgcgttcggtgcaggcatcgcagtctatttcaccgccgcacgtgagccggtggcg
gccatcgtggtgccggtcgcggcgggcgcctgcgtcgtcgcatttctcgtgcggcgtcac
gcattgtttccgatcctcgcgctctttgcagcgatgcttgcgggctttgccaccgcgacg
ctgaagaccgcgcgtgtcgcgcatcccgtgctgcttgcgccggtcggcatggcgacgctg
gagggtttcgtcgagacgcatgaggaacgcgaacgcaccgaccgcttcgtgctgcggatc
acgaagatcgacgcgcgcggtgcgccgcatcttgagcgggtgcggctctcggtgcgcaag
ggtaccgcacccgcggtcggccagtatgtcgccctgaaggcgcgactgttgccgccgctg
cggccgttgcgcccgggtggttacgacttcgcgcgcgatatgtatttccagggcctgggc
gcctccggcttcgtgctcggcgcgatcaagcttactgacgcgccgcaagagggcgacctg
atgctgcgctactggaccgccgtgcagggcatgcgtgacggcgtcgatgctcgcatccgc
acagtgctgtctggcgacgagcgcgcgattgcgaccgcgcttctcaccgggcggcgggat
gcgatctccgcgccggtcaacgatgcactgttcgtctccgggctcggtcatgtgctgtcg
atctcgggctatcacatggcggtcgttgcgggcgtggtgttcttcgcgatccgcgcattg
ctggcattgagcgtaacgctcaacacgcgttgtccgatcaagaaatgggcggcggccgcg
gcgcttgttgcggcggcgttctatcttctcctatcgggtgcggaagttgcgacccagcgc
gcctttgcgatgacggcgctggtgctgatagccgtcatggtggaccgccgcgcgattact
tttcgtaccctcgcactcgctgccatgctggtgctgctgattgcgccggaagcgctggtg
catccgagtttccagatgtcgtttgccgcaacgctcgcgctcgtgatgcttgcgcagaac
ggattgccgggctggttcaccgacaacgatggcgcgcttggccgcttcgccgcgtggggc
gggcgcgaattgtttgtgctggccgccgcatccttcgtcgcgggccttgcgaccacaccg
tacgcggcttttcacttccaccggatcgcgccctacggtgtgattgccaacctcgtggcg
atgccggtggtgtccgtgctggtgatgcccgcgggccttctcggtatcgttgcgattccc
ttcgggctcgatagtctgttctggcaactgatggatgtcggtatcgactggatgatcgcg
gtgtcgcaatgggtcgtggcgctgccgggcgcgttcggccgcgttcatgccttcggcgtc
ggatcgcttctcgtcatcagcgccggcattatcgtgttaggtctgttgcgtacgccactg
cgctgggcgggtgcagcattgatcggtggtggtatccttctcgcggcgcaggcgacaccg
ccggatgttctgatcgcgcgagatgccgcaagcgtcgcggtgcgcggcagggacgggcaa
ttgcgcatcatgcccacggcgaagaatgcattcgtcgcccgcgaatggttggcggccgat
gccgatgcgcgcgtaacgacggacccgagcctcacgctgggcgtatcgtgcgatgcgacg
gggtgcgtagtcgaaggcaagggcggcgacctcgttgcgctggcgcattggcctgaggcg
ctgacggatgattgcgcgcgggcaaagatcatcgtgacgtcccacgccgtgccggccgat
tgtgctgcgcggatcttcgatcgcgatagcctgcggcagctcggcggcatggcgctggtc
cgaacggacgacggctacaggatgatcgcaggcgagccgcagggcctcgaccggccatgg
gcaccggcaattgcggtggaggtctcaggcgtgcaccgccgtgcggagcaagcggcgata
cctgtcgatgcaacgcccgcggaggctgaccggcaagctgacgactag
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