Afipia carboxidovorans OM4: OCA4_c20820 Help Entry OCA4_c20820       CDS       T01967                                  Symbol rnj Name (GenBank) ribonuclease J   KO K12574   ribonuclease J [EC:3.1.-.-] Organism oco  Afipia carboxidovorans OM4 Pathway oco03018   RNA degradation Brite KEGG Orthology (KO) [BR:oco00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     OCA4_c20820 (rnj)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:oco03019]     OCA4_c20820 (rnj) Messenger RNA biogenesis [BR:oco03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      OCA4_c20820 (rnj) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP RMMBL RNase_J_C Lactamase_B_2 Lactamase_B Motif Other DBs NCBI-ProteinID:  AEI03213 LinkDB All DBs Position complement(2270253..2271923) Genome browser AA seq 556 aa AA seqDB search MARADELSFVPLGGIGEIGMNLSLYGLGKGRQRSWLAVDLGVSFGNEEHLPGIEIVMPDI RFLESERKNLVGLVLTHAHEDHFGAIIDLWPRLQCPIYATKFSASLFEAKCAAERTPTNI PVTVVESGARIDVGPFNVEFIAVQHSIPESHALAIRTSEGVVLHTGDWKLDPTPLIGEPT NEKRLREIGDEGVLALVGDSTNAVREGRSPSEREVARSLTEIIKAAKGRVAVTTFASNVS RLRAVAEAAREAEREVVLIGRAMERVAQVARETGYLDGVAPFRGADYYGHFPPDKVLALC TGSQGEPRAALARIANDDHPDVTLNKGDTVIFSSRTIPGNERAVGGIINNLVTRGIKVIT DRTHLVHVSGHPRREELRELISWVRPQLLIPAHGEALHLSEHADLARACGVPKVMICKNG DLVRLGPGEPAIVEEVPAGRLYKDGKILEDQNSRAVVARRRLAFAGSAFVALALTEKGEL ADDPQVDLIGIPERNTAGELIDELVYDVAVSTFENLPRAKRGDPDAVGEAVRRAVRSAIA EQWGKKVVCVVHVLEV NT seq 1671 nt NT seq  +upstreamnt  +downstreamnt atggcgcgtgctgatgaattgagttttgtgccgctcggtggcatcggcgagatcggcatg aacctgtcgctctacggcctcggcaagggccggcagcgttcgtggctcgcggtcgatctc ggcgtctccttcggtaatgaggagcatctgcccggcatcgagatcgtgatgccggatatt cgctttctggaatccgaacgtaagaatctggtcggcctcgtcctgacccacgctcatgag gaccatttcggcgcgatcatcgatctgtggccgcgcttgcaatgcccgatctacgccacg aaattctctgcgtcgctgttcgaggcgaagtgcgcagccgaacgcaccccgacgaacatt cctgtcacggtggtcgaatccggcgcacggatcgatgtcgggccgttcaacgtcgaattc atcgccgtgcagcactcgatcccggaatcgcatgcgctggcgatccgcacctccgaaggt gtcgtgctgcataccggcgactggaagctcgatccgacgccgctgattggcgagccgacc aatgaaaagcggctgcgcgagatcggcgacgagggcgtgctggcgctggtcggcgattcc accaatgccgtgagggaaggccgctcgccctcggagcgggaggtcgctcgcagtctcacc gagatcatcaaggccgcgaagggccgcgtggcggtgacgacgttcgcctccaacgtctcg cggctgcgcgccgtggcggaggccgcccgcgaggccgagcgtgaagtggtgctgatcggc cgggcgatggagcgcgtggcgcaggtcgcgcgcgagaccggctatctcgatggcgtcgcg ccgttccgcggggcggactattacggccatttcccgccggacaaggtgctcgcgttgtgc accggcagccagggcgagccgcgcgcggcactggcgcgcattgcgaacgacgatcatccc gacgtgacgctcaacaagggcgacaccgtgatcttctcctcgcgcaccattcccggcaac gaacgagcggtcggcggcatcatcaacaatctcgtcacccgcggtatcaaagtgatcacc gaccggacgcatctcgtgcatgtctccggccatccgcgccgcgaggaactgcgcgagttg atctcatgggtgcggccgcagcttctcattccggcgcatggcgaggcgctgcatctgtcc gagcacgccgacctcgcgcgcgcctgcggcgtgcccaaggtgatgatctgcaagaacggc gatctggtgcggcttgggccgggcgaaccggcgattgtcgaagaggtgccggcagggcgg ctctacaaggacggcaagattctggaggaccagaattctcgcgccgtggttgcacgtcgc cgtttggctttcgcgggaagtgcctttgtcgcgttggcgctgaccgagaagggcgagctt gccgacgacccgcaggtcgacctgatcggtattccggaacgcaacaccgccggtgaattg atcgacgaactggtgtacgacgtcgcggtttcgaccttcgagaacctgccgcgtgccaag cggggcgatcccgatgcggtcggcgaggcggtgcggcgtgccgtccggtcggcgattgcc gagcagtggggtaagaaggtcgtctgcgtcgttcacgttcttgaggtctga

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