KEGG   Afipia carboxidovorans OM4: OCA4_c21550
Entry
OCA4_c21550       CDS       T01967                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
oco  Afipia carboxidovorans OM4
Pathway
oco00740  Riboflavin metabolism
oco01100  Metabolic pathways
oco01110  Biosynthesis of secondary metabolites
oco01240  Biosynthesis of cofactors
oco02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:oco00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    OCA4_c21550 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    OCA4_c21550 (ribD)
Enzymes [BR:oco01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     OCA4_c21550 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     OCA4_c21550 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: AEI03282
LinkDB
Position
complement(2345060..2346199)
AA seq 379 aa
MAQASASAAVSSEDHRFMQLALALGRRGQGATWPNPAVGAVVVKDGVILGRGWTQPGGRP
HAEPQALQRAGEAARGATLYVTLEPCSHYGKSPPCVDAIIVSGIARVVSAIEDPNPQVAG
QGHVRLRDAGITVDVGLCRDEAAQAHSGHFLRVREGRPHVTLKLAVSADGKIAAAGGKPV
RITGEAANARVHLLRAESDAILIGIGTALADDPLLTCRLPGMEHRSPVRVVLDRALRLPG
ASRLVHSARQTPLWIIAAETAEAAAAARLGVAGAHLFRLPVEDRAAGLDLNAVLRTLSEQ
DITRLLVEGGAKVASSFLAARLVDEFWLLQGAKSIGDDGLPALEGQDLDAVTASSGWRID
ATQMLGDDRLTISRRVESI
NT seq 1140 nt   +upstreamnt  +downstreamnt
atggcgcaggccagcgcttcggcggccgtttcttctgaagaccatcgcttcatgcaactc
gcgctcgcgctcggccggcgcgggcagggtgcgacttggccgaaccccgctgtcggcgcg
gtggtggtgaaggatggcgtcattctcgggcgtggctggacacagcccggtggccgcccg
catgccgagccgcaggctttgcaacgagcgggcgaagcagcgcgaggtgcaacgctctat
gtgacgctcgagccgtgctcgcattacggtaagtcgccgccttgcgtggatgcgatcatc
gtatccggcatcgcgcgcgtggtgtcggcgatcgaggatcccaatccgcaggtggcggga
cagggccatgtgcgattgcgggatgcagggattacggtagatgtcgggctgtgccgggac
gaagcggctcaggcgcattcggggcatttcctgcgggtgcgcgagggccggccgcacgtc
acacttaagctcgcggtctcggccgatggcaagatcgcagccgcgggcggcaagccggta
cggatcactggcgaggccgcgaatgcgcgggttcaccttttgcgcgcggaaagcgatgcg
atcctgatcggcatcggcacagcgctggccgacgatccgctgctgacctgtcgtttgccc
ggcatggagcatcgctcgccagtgcgtgtggtgcttgatcgcgcgctgcgattgccgggc
gcgagccgccttgtgcattccgcgcggcaaacgccgctgtggatcattgccgctgagacg
gcggaggccgcggctgcggccagactcggcgtcgccggggcgcatctgttccgtctgccg
gtggaagatcgcgcggccggtctcgatctgaacgctgtgttgcggaccttgtcggagcag
gacatcacgcgactgctggtcgagggtggcgcaaaggtggcgtcgtcgtttctagccgcc
cggctcgtcgatgagttttggctgctgcaaggcgcgaaaagcatcggtgacgatggtttg
ccggcgctggaagggcaggaccttgatgccgtcaccgcatcgtccggctggcgcatcgac
gcaacgcaaatgttgggcgatgatcggctgacaatctcccggcgcgtcgaatccatctga

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