Afipia carboxidovorans OM4: OCA4_c21570
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Entry
OCA4_c21570 CDS
T01967
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase GlyA
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco00260
Glycine, serine and threonine metabolism
oco00460
Cyanoamino acid metabolism
oco00630
Glyoxylate and dicarboxylate metabolism
oco00670
One carbon pool by folate
oco00680
Methane metabolism
oco01100
Metabolic pathways
oco01110
Biosynthesis of secondary metabolites
oco01120
Microbial metabolism in diverse environments
oco01200
Carbon metabolism
oco01230
Biosynthesis of amino acids
oco01240
Biosynthesis of cofactors
oco04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
OCA4_c21570 (glyA)
09102 Energy metabolism
00680 Methane metabolism
OCA4_c21570 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
OCA4_c21570 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
OCA4_c21570 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
OCA4_c21570 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
OCA4_c21570 (glyA)
Enzymes [BR:
oco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
OCA4_c21570 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Poly_A_pol_cat
Motif
Other DBs
NCBI-ProteinID:
AEI03284
LinkDB
All DBs
Position
complement(2346735..2348036)
Genome browser
AA seq
433 aa
AA seq
DB search
MPSSAQNASTPNTFFTASLAAADPEIADAIKGELGRQQHEIELIASENIVSRAVLEAQGS
VMTNKYAEGYPGKRYYGGCEWVDVAETLAIERAKKLFGAQFANVQPNSGSQMNQAVFLAL
LQPGDTFMGLDLAAGGHLTHGSPVNMSGKWFKAAHYTVRRDDQLIDMDEVAKQAEQVKPK
LIIAGGSAYSRPWDFKRFREIADSVGAYFMVDMAHFAGLVAGGVHASPVPHAHVTTTTTH
KSLRGPRGGLILTNDEDIAKKINSAIFPGLQGGPLMHVIAAKAVAFKEALQPDFKVYAKN
IVENARALAETLRGHGFEIVSGGTDNHLMLVDLRPKGLKGNISERALVRSGLTCNKNGIP
FDPEKPFVTSGLRLGTPATTTRGFGVAEFKQVGALIAEVLNAVAQSPDGAAPGVEESVKK
RVRELTDRFPIYS
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcttccgcgcagaacgcctcgacccccaatacgtttttcaccgcctcgctggcc
gcggccgatcccgagatcgccgatgcgatcaagggcgagctgggtcgccagcagcacgag
atcgagctgatcgcctccgagaacatcgtgagccgcgccgtgctcgaggcgcagggctcg
gtgatgaccaacaagtacgcggagggttatcccggcaagcgctactacggcggttgcgag
tgggtcgacgtcgctgagacgctcgcgatcgagcgcgccaaaaagctgttcggcgcgcag
ttcgccaacgtgcagccgaactccggcagccagatgaatcaggcggtgtttctcgcgctg
ctgcaacccggcgataccttcatgggtctcgatcttgctgcgggcggccatctcacccac
ggctcgccagtcaacatgtccggcaagtggttcaaggccgcgcactacaccgtgcgccgt
gacgatcagttgatcgacatggacgaagtggcgaagcaggccgagcaggtgaagccgaag
cttatcatcgccggtggctccgcttattcacgtccgtgggacttcaagcgcttccgcgag
atcgccgacagcgtcggcgcctatttcatggtggacatggcgcacttcgccggtctcgtt
gcgggcggcgtgcatgcttcgccggtgccccatgctcacgtcacgacgacaacgacgcac
aagtcgctgcgcggtccgcgcggcggcctgatcctcaccaatgatgaggacatcgccaag
aagatcaactcggcgatcttccccggcctacagggcgggccgctgatgcacgtcatcgcc
gccaaggcagttgccttcaaggaagcgctgcagcccgacttcaaggtctacgcgaagaac
atcgtcgaaaatgcccgggcacttgcggaaacgctgcgcggccatggtttcgagatcgtc
tccggcggcaccgacaatcacctgatgctggtcgaccttcgtcccaaggggctgaagggc
aacatctcggagcgggcgctggtgcgctcgggtctcacctgcaacaagaacggcattccg
ttcgaccccgaaaagccgttcgtgacctcgggcctgcgcctcggcacgccggcaacgacg
acgcgcggttttggcgttgcagagttcaagcaggtcggcgcgctgatcgccgaagtgctg
aacgcagttgcgcagtcgccggatggtgccgcgccgggcgtcgaggaatcggtgaagaag
cgggtacgcgaactcaccgatcggttcccgatctattcgtag
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