Afipia carboxidovorans OM4: OCA4_c21980
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Entry
OCA4_c21980 CDS
T01967
Name
(GenBank) histone-like nucleoid-structuring protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
oco
Afipia carboxidovorans OM4
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oco03036
]
OCA4_c21980
03400 DNA repair and recombination proteins [BR:
oco03400
]
OCA4_c21980
Chromosome and associated proteins [BR:
oco03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
OCA4_c21980
DNA repair and recombination proteins [BR:
oco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OCA4_c21980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS
Motif
Other DBs
NCBI-ProteinID:
AEI03324
LinkDB
All DBs
Position
complement(2386679..2387056)
Genome browser
AA seq
125 aa
AA seq
DB search
MSIKKLELESMPIDDLWSFHERISKILAERITSEKQELEERLAVLNRGRNAFGGDLAHSL
DSNNKVRRKYPRVFPKYRNPAAPSETWSGRGKQPRWLVAAIKSGRKIDDFRIRDQASAKG
RRQRA
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcaagaaacttgaactagaatctatgccgattgacgacctgtggtcgtttcat
gaaaggatcagcaagatcctggccgagcgaattacttccgaaaaacaggagttggaggag
cgcttggcggttctgaaccgcggacgaaatgcgttcggcggcgatttggctcactcgctg
gattcgaataacaaggttcggcggaaatatcccagagtatttccgaagtaccgtaatccg
gctgcaccgtccgagacttggtctggtcgcggcaagcagccgcgatggctggtcgctgcg
atcaagtctggtcgcaagatcgatgatttccgtattcgtgaccaggccagtgcaaaggga
cggcgccagcgcgcttga
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