Afipia carboxidovorans OM4: OCA4_c24530
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Entry
OCA4_c24530 CDS
T01967
Name
(GenBank) RecT family protein
KO
K07455
recombination protein RecT
Organism
oco
Afipia carboxidovorans OM4
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oco03400
]
OCA4_c24530
DNA repair and recombination proteins [BR:
oco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
OCA4_c24530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecT
SPATS2-like
Motif
Other DBs
NCBI-ProteinID:
AEI03573
LinkDB
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Position
2623262..2624647
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AA seq
461 aa
AA seq
DB search
MAKTETRERTQADHRSAEPAPNVNVPAQKSNHPVAVFREYAMQRISTLQELPHIDPQQLL
SVALTAIQRKPDLMRCTPQSLWNACVLAAQDGLLPDGREGAIVPYGENADGKRVAEIATW
MPMVEGLRKKVRNSGQIKDWYVELVYAGDFFRYRKGDDPRLEHEPVPPSQRTPNTPFHGI
VAAYSIAVFTDGSKSAPEVMWIEEIEKVRTKSKAKNGPWQDSAFYPEMCKKVVARRHYKQ
LPHSAGMDKLIQRDDDDYDFDRQDEALVQQRQHRRLVSTTSAFDEFARNGQTIDHRASDP
VHQDGDDEFAEDEPSHDETGADETDRTSANSKPETGGAADQREEAAVNSKDEQQQHAEPQ
QQTQAEQTTANDGKPAAKFDPHVGEEVRRWPPGAVPSDPDEYEFYVETKLSDYTRETADK
IPDWWKSAEEKKLREACGISKQRHDELRNKAASRKTELLKG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaactgaaacgagagagcgcactcaagcggaccaccgctcggcagagcccgcg
ccgaacgtgaatgttccggctcagaagagcaaccatccggtcgcggtattcagggaatac
gcgatgcagcgtatcagcactctgcaggaactgccccacatcgatccgcagcaacttcta
agcgttgcgctcactgcgatccagcgcaagccagacctgatgaggtgcacgccacagtct
ctttggaatgcctgtgttctagcagcacaagatgggcttctgcccgatggacgcgaaggc
gcgatcgttccctatggcgaaaacgctgacggcaaacgcgtggctgaaatcgccacgtgg
atgccgatggtcgagggacttcgcaagaaggtccgcaacagcgggcagatcaaagactgg
tatgtcgaactggtctacgccggcgacttctttcgttatcgcaagggcgatgatccgcgg
cttgagcatgaacctgttccgccaagccagcgaacgccgaacacgccgttccacgggatt
gtcgcggcgtattcaatcgcagtcttcactgacgggtcaaagtccgcgcctgaagttatg
tggatcgaggagatcgagaaggtccgcacaaaatcgaaggcgaagaacggtccgtggcaa
gacagcgccttctatcctgaaatgtgcaagaaggtggttgcgcgccgccactacaagcag
cttccgcattccgctgggatggacaagctgatccagcgcgacgacgacgattacgacttc
gaccggcaagatgaagccttggtgcagcagcgccagcatcgccgcctcgtgtccacgact
tcagcattcgatgagtttgcgcgaaacgggcaaacgatcgatcaccgggcttccgatcct
gttcatcaggatggcgacgacgaattcgccgaagatgagccgagccatgatgaaaccggc
gcggatgagaccgaccggacgtctgccaacagcaagcccgagactggcggcgcggccgat
cagcgcgaagaagcggccgtcaacagcaaggacgaacagcagcagcacgcggagcctcag
cagcagacgcaggccgagcagaccaccgcgaacgacggcaagcccgctgcgaaattcgat
cctcacgtcggtgaagaggtccgccgctggccgcctggcgcagtcccgtccgatcccgac
gaatacgagttctatgtcgagacgaagctgtcggactatacgcgcgagacggccgataaa
atccccgattggtggaagtcggcggaagaaaagaagctgcgcgaggcctgcggtatcagc
aagcagcgtcatgacgaactgcgcaacaaagcggcgtcacgaaaaaccgaactgctgaag
ggctga
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