Afipia carboxidovorans OM4: OCA4_c24880
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Entry
OCA4_c24880 CDS
T01967
Symbol
groL2
Name
(GenBank) 60 kDa chaperonin 2
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OCA4_c24880 (groL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oco03019
]
OCA4_c24880 (groL2)
03110 Chaperones and folding catalysts [BR:
oco03110
]
OCA4_c24880 (groL2)
03029 Mitochondrial biogenesis [BR:
oco03029
]
OCA4_c24880 (groL2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oco04147
]
OCA4_c24880 (groL2)
Enzymes [BR:
oco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
OCA4_c24880 (groL2)
Messenger RNA biogenesis [BR:
oco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
OCA4_c24880 (groL2)
Chaperones and folding catalysts [BR:
oco03110
]
Heat shock proteins
HSP60 / Chaperonin
OCA4_c24880 (groL2)
Mitochondrial biogenesis [BR:
oco03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
OCA4_c24880 (groL2)
Exosome [BR:
oco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
OCA4_c24880 (groL2)
Exosomal proteins of other body fluids (saliva and urine)
OCA4_c24880 (groL2)
Exosomal proteins of breast cancer cells
OCA4_c24880 (groL2)
Exosomal proteins of colorectal cancer cells
OCA4_c24880 (groL2)
Exosomal proteins of bladder cancer cells
OCA4_c24880 (groL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AEI03607
LinkDB
All DBs
Position
2650842..2652485
Genome browser
AA seq
547 aa
AA seq
DB search
MSAKEVKFGVDARDKMLRGVDILANAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKDI
ELEDKFENMGAQMVREVASKSADLAGDGTTTATVLAQAIVKEGAKAVAAGMNPMDLKRGI
DLAVEAVVADLQKNSKKVTSNDEIAQVGTISANGDTEIGAFLAKAMQKVGNEGVITVEEA
KSLDTELDVVEGMQFDRGYISPYFVTNADKMRVEFDDAYVLINEKKLSSLNELLPLLEAV
VQTGKPLVIVAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLQDIAILTGGQA
ISEDLGIKLENVTLQMLGRAKKVMIDKENTTIVNGAGKKADIEARVAQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGILPGGGTALL
RASEGLKRIKTQNDDQKTGVEIVRKALSAPARQIAINAGDDGSVIVGKVLEKEQYAYGYD
AQNHEYGNLVSKGIIDPTKVVRAAIQNAASVASLLITTEAMIAELPKKGGAGAPGGMPGG
GMGGMDF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccaaagaagtaaaattcggcgtcgacgcgcgcgacaagatgctgcgcggtgtc
gacattctcgccaacgcggtgaaggtcaccctcggcccgaagggccgcaacgtcgtgctc
gacaagtcgttcggcgcgccgcgcatcaccaaggacggcgtcaccgtcgccaaggacatc
gagcttgaggacaagttcgagaacatgggcgcacagatggtgcgcgaagtcgcctcgaag
tcggcagacctcgccggcgacggcaccaccaccgcgaccgtgctcgcgcaggcgatcgtc
aaggaaggcgccaaggcggttgccgccggcatgaacccgatggacctcaagcgcggcatc
gacctcgcggtcgaggctgtcgttgcggacctgcagaagaactccaagaaggtcacctcg
aacgacgagatcgcccaggtcggcaccatctcggccaacggcgacaccgaaatcggtgcg
ttcctcgccaaggcgatgcagaaggtcggcaacgaaggcgtcatcaccgttgaggaagcg
aagtccctcgacaccgagctcgacgtcgtcgaaggcatgcagttcgaccgcggctacatc
tccccctacttcgtcaccaacgccgacaagatgcgcgtcgagttcgacgacgcctacgtc
ctcatcaacgagaagaagctctcctcgctgaacgagctgctgccgctgctcgaggccgtg
gtgcagaccggcaagccgctcgtcatcgtcgctgaagacgtggaaggcgaggctctcgcc
accctcgtcgtcaaccgtctccgcggcggtctgaaggttgccgccgtcaaggcgccgggc
ttcggcgatcgccgcaaggccatgctgcaggacatcgcgatcctgaccggcggccaggcg
atttcggaagacctcggcatcaagcttgagaacgtgaccctgcagatgctcggccgcgcc
aagaaggtgatgatcgacaaggagaacaccacgatcgtcaacggtgccggcaagaaggcc
gacatcgaggcgcgcgtggcgcagatcaaggcgcagatcgaggagaccacctcggactac
gaccgtgagaagctgcaggagcgtctcgccaagctcgcgggcggcgtcgcggtgatccgc
gtcggcggcgcgaccgaggtcgaggtgaaggaacgcaaggatcgcgtggacgacgcgatg
catgcgacccgcgcggctgtcgaggaaggcattcttccgggcggcggcaccgctctcctg
cgcgccagcgaaggcctgaagcgcatcaagacccagaacgacgaccagaagaccggcgtc
gagatcgtgcgcaaggctctctccgcgccggcccgccagatcgccatcaacgccggcgac
gacggctcggtgatcgtgggcaaggtgcttgagaaggagcagtacgcttacggctacgac
gcgcagaaccacgagtacggcaacctggtctcgaagggcatcatcgacccgaccaaggtc
gtgcgcgctgcgatccagaacgcggcttcggttgcctcgctcctcatcacgacggaagcg
atgattgccgaactgcccaagaagggcggcgccggcgcaccgggcggcatgcccggcggc
ggcatgggcggcatggatttctaa
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