Afipia carboxidovorans OM4: OCA4_c25120
Help
Entry
OCA4_c25120 CDS
T01967
Symbol
livJ
Name
(GenBank) Leu/Ile/Val-binding protein LivJ
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco02010
ABC transporters
oco02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
OCA4_c25120 (livJ)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OCA4_c25120 (livJ)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oco02000
]
OCA4_c25120 (livJ)
Transporters [BR:
oco02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
OCA4_c25120 (livJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AEI03631
LinkDB
All DBs
Position
2672366..2673475
Genome browser
AA seq
369 aa
AA seq
DB search
MIPTRLLAVTCVALFGFSAQATAQTIPVAVAGPMTGGESAFGRQMRNGAEQAVADLNDAG
GVLGKKLALQIGDDACDPKQARSVAEKLANSGTVFSAGHYCSSSSIPASEVYADGNVLQI
SPGSTNPLLTERKLWNVLRVCGRDDQQGSAAAKYLIKNYAGKNIAILNDKTTYGKGLADE
TKKALNAGGVQEKLFESYNKGDKDFNSIVSRLKRENIDLVYVGGYHQEAGLILRQMRDQG
LKTVMMAGDALNDKEFASITGPLAAGTLFTFGPDPRNRPDAKAIVDKFKAKNIDPEGYTL
YTYAAFQVWSQGAAKAGTTDPQKVITAIKAGEWNTVIGPLSFDAKGDIKQTGYVVYKWDD
KGGYAELTN
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgatcccaacccgcttgctcgccgtcacctgcgtggcgctgttcggcttttcggcgcag
gccacggctcaaaccatcccggtcgccgtcgccggccccatgaccggcggcgaatccgct
ttcggccggcaaatgcgcaacggcgccgaacaggcggttgcggacctcaacgacgcaggc
ggcgtgcttggcaagaagcttgcgctgcagatcggggacgatgcctgcgatccgaagcag
gctcgttccgtagcggagaagctcgccaattcgggcacggtgttctcggccggacattac
tgctcgtcctcctcgatcccggcctcggaagtttatgccgacggcaacgttcttcagatc
agccccggttcgaccaacccgcttctgaccgagcgcaagctgtggaacgtgctgcgcgtc
tgcgggcgtgacgaccagcagggcagcgccgccgcaaagtatctcatcaagaattacgcc
ggcaagaacatcgcgatcctcaacgacaagaccacctatggcaaaggtctcgcggacgag
accaagaaagcgctcaacgcaggcggcgtccaggagaagctgttcgagtcctacaacaag
ggcgacaaggactttaattccatcgtgtctcgcctgaagcgcgagaacatcgatctcgtc
tatgtcggcggttatcatcaggaggcaggcttgatcctgcgccaaatgcgcgatcagggc
ctcaagacggtgatgatggcaggcgatgcgctgaacgacaaggaattcgcctccatcacc
ggcccgcttgccgccggcacgctgttcaccttcggccccgacccgcgcaaccgtccggat
gcgaaggctatcgtcgacaagttcaaggcgaagaatatcgatccggaaggctacacgctc
tacacctacgcagctttccaggtctggtcgcagggcgcagccaaggccggcaccaccgat
ccgcagaaggtgatcaccgctatcaaggccggtgagtggaatacggtgatcggcccgctg
tcgttcgatgccaagggcgacatcaagcagaccggctacgtcgtctacaagtgggacgac
aagggcggctacgccgagttgaccaactaa
DBGET
integrated database retrieval system
