Afipia carboxidovorans OM4: OCA4_c27300
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Entry
OCA4_c27300 CDS
T01967
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase MurF
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco00300
Lysine biosynthesis
oco00550
Peptidoglycan biosynthesis
oco01100
Metabolic pathways
oco01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OCA4_c27300 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OCA4_c27300 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
OCA4_c27300 (murF)
Enzymes [BR:
oco01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
OCA4_c27300 (murF)
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AEI03848
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Position
complement(2910591..2912027)
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AA seq
478 aa
AA seq
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MTTALWTTAAMAEAMHATRSGALPESINGISIDSRTIAPGEAYFAIKGDVHDGHAFVEAA
LKNGGGLAVIAQSQRAKFSGDLPLLVVPDVLAGLVDLAKAARARTQAKIVAVTGSVGKTS
TKEALRTVLQAQGATHVSAASFNNHWGVPLSLARCPQDAKFAVFEIGMNHAGEIEPLVKL
VRPHVAIITTVEPVHLEFFSGIEAIADAKAEIFTGLEPGGAAILNRDNSQFARLAERAKA
CGVARIVTFGENEHADARLLDVALHAECSAVHADVLDHDVTYKVGVAGRHMAMNSLAVLA
ASTLVGGDLALSALALAAFEPTAGRGVRHALGLPGGTATLIDESYNANPASMAAAMSVLG
RVAIGPQGRRIAVLGDMLELGPQGRELHRGLAAAITANRIDLVFCCGPLMHDLWDALPSA
RKGGYSETSVGLESQLVAGVRAGDAIMVKGSLGSRMKVIVTALEKNFPNGADADDLTV
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggcgctgtggaccacggctgcgatggcggaggcgatgcacgccacgcgaagc
ggcgcgctgccggagagcatcaacggcatttccatcgacagccgcaccatcgcgccgggc
gaagcttatttcgccatcaagggcgacgtgcatgacggccacgccttcgtcgaggcggca
ctgaagaacggcggcggcctcgcggtgatcgcgcaatcgcagcgcgcgaaattttccggc
gacctgccgctcttagtggtgccggatgtgctcgcgggccttgtcgatctcgcgaaagcc
gcgcgcgcgcggacacaggcgaagatcgttgcggtgacaggctcggtcggcaagacctcg
accaaggaagcgttgcgcaccgtgctgcaggcgcagggcgcgacgcatgtgtcggcggcg
tccttcaacaaccattggggcgtgccgctgtcgctcgcgcgctgcccccaagatgcgaag
ttcgcggtgttcgagatcggcatgaaccacgcaggcgaaatcgagccgctggtgaagctg
gtgcgcccgcatgtcgcgatcatcaccacggtcgagccggtgcatctcgaattcttttcc
ggcatcgaggcgattgccgatgccaaggcggaaattttcaccggcctcgagccgggcggc
gctgcgatcctcaatcgcgacaattcgcagttcgcgcgccttgcggagagggcgaaggcg
tgcggcgtcgcgcgtatcgtcacgttcggggagaacgagcacgcggatgcacggctcctc
gatgtggcgctgcatgccgaatgctcggcggtgcatgccgatgtgctggatcatgatgtc
acctacaaggtcggcgtcgcgggccggcacatggcgatgaactcgctcgcggtgctcgcc
gcgtccacgctcgtgggcggagaccttgcgctgtcggccctcgcacttgcggccttcgaa
cccacggccggacgcggcgtgcggcatgcactcgggctgccgggcggcacggcgacgctg
atcgacgagagctacaacgccaatccggcttcgatggcggcggcgatgagcgtgctcggt
cgcgttgcgatcgggccgcaggggcggcgcatcgcggtgctgggcgacatgctggaactc
gggccgcaggggcgggagctgcaccgtggcctcgctgcggcgattaccgccaaccggatc
gacctcgtgttctgctgtgggcccttgatgcacgatctctgggatgcccttccctcggcg
cggaaggggggctattccgaaacttcggttgggctcgaatcgcagcttgtcgcgggcgtt
cgtgcgggcgatgcgatcatggtgaaaggctcgctcggctcgcgcatgaaagtgatcgtg
accgcgctagagaagaattttccgaacggcgcggatgccgacgatctcacggtatag
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