Afipia carboxidovorans OM4: OCA4_c27440
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Entry
OCA4_c27440 CDS
T01967
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco00071
Fatty acid degradation
oco00280
Valine, leucine and isoleucine degradation
oco00310
Lysine degradation
oco00362
Benzoate degradation
oco00380
Tryptophan metabolism
oco00410
beta-Alanine metabolism
oco00640
Propanoate metabolism
oco00650
Butanoate metabolism
oco00907
Pinene, camphor and geraniol degradation
oco00930
Caprolactam degradation
oco01100
Metabolic pathways
oco01110
Biosynthesis of secondary metabolites
oco01120
Microbial metabolism in diverse environments
oco01200
Carbon metabolism
oco01212
Fatty acid metabolism
Module
oco_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
OCA4_c27440 (fadJ)
00650 Butanoate metabolism
OCA4_c27440 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
OCA4_c27440 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
OCA4_c27440 (fadJ)
00310 Lysine degradation
OCA4_c27440 (fadJ)
00380 Tryptophan metabolism
OCA4_c27440 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
OCA4_c27440 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
OCA4_c27440 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
OCA4_c27440 (fadJ)
00930 Caprolactam degradation
OCA4_c27440 (fadJ)
Enzymes [BR:
oco01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
OCA4_c27440 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
OCA4_c27440 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
OCA4_c27440 (fadJ)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
Methyltransf_31
ApbA
DAO
Pyr_redox_2
NAD_Gly3P_dh_N
Sacchrp_dh_NADP
Methyltransf_12
AlaDh_PNT_C
Pyr_redox
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
AEI03862
LinkDB
All DBs
Position
complement(2926709..2928790)
Genome browser
AA seq
693 aa
AA seq
DB search
MDSKILNAMKDHVLELGPEPSSGPYRHFKLTRDEDGIAWLLFDREGASANTLSSEVLEEF
SQILSVLESERPSGLVLRSAKRSGFIAGADINEFRGLSDVSIVEQQLGHGHDILNRLENI
KLPTVAVIHGFCLGGGLEVVLACNMRIAIEGARFGFPEILLGLHPGFGGTARATHLFNPL
EAMTMMLTGKTVEARKAKALGLVDAVTQERHVRNAVKDAIFGRLKRKRLKLTTLMNLGPA
RKLLASRMRKEAANKAPQENYPAPYALIDLWEKHGGNRADMLAAEKPSFAKLMVTSTAQN
LIRVFFLRDEMKKLAGGKSKIRHVHVIGAGAMGGDIASWCAHQGLRVTLADMQPAAIANA
MKRAADLFAKIARGRIAQRDTLDRLIPDMTGEGAKQADLIIEAVPEKLQLKQSIYAGLEK
VMRPDAILATNTSSIPLEELRASLQRPERLLGIHFFNPVSRLQLVEVISHDQVDQEALAT
AMKFVGGIDRLPLPVKSSPGFLVNRALMPYLMEALLMLDEKVDKLTIDEAAEKFGMPMGP
IELADQVGLDICLAVGDELRAKLGDSIPVAPDWLRDKVAKGELGRKTGRGFYEWKDGRVQ
KGHAHVHATPEMTDRLVLPMSNVCVACLREGIVDNPDTVDGAMIFGTGYAPFRGGPLNYA
RERGPENVANALLVLAEKYGERFKPDAGWATFR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggacagcaaaatcctcaatgcgatgaaggaccacgtccttgaactcgggcctgagccg
tcgtccggaccttatcgccatttcaagttgacgcgcgacgaagacggaatcgcctggctg
ctgttcgaccgcgaaggcgcaagcgccaacacgttgtcgagcgaggtgctggaagaattc
tcgcagatcctctcggtgctggagagcgagcgcccgagcgggcttgtgctgcgctcggcc
aagcgctccggcttcatcgcgggtgcggacatcaatgaattccgcggtctctccgatgtc
agcatcgtcgagcagcagcttggtcacgggcatgacattctcaaccggcttgagaacatc
aagctgccgacggtcgcggtaatccacggcttctgcctcggcggcgggcttgaggtcgtg
ctcgcctgcaacatgcggatcgcgatcgaaggcgcacgcttcggattcccggaaatattg
ctcggcctgcatccgggctttggcggcacggcgcgcgcaacgcatctgttcaatccgctc
gaagcgatgaccatgatgctgacgggcaagaccgtcgaggcgcgcaaagcgaaggcgctc
ggccttgtcgatgctgtgacgcaggagcgccacgttcgcaatgcagtgaaggatgcgatc
ttcggtcgcctgaagcgcaagcgcttgaagctgacgacgttgatgaaccttggtccggcc
cgcaagctgctggcttcgcgcatgcgtaaggaggctgccaataaagcgccacaggagaat
taccccgcgccctacgcgctgatcgatctgtgggagaagcacggcggcaaccgcgccgac
atgctggcggcggagaagccgtccttcgccaaactgatggtgacgtcgaccgcgcagaat
ctcattcgtgtgttcttcctgcgcgacgagatgaagaagctcgcgggcggcaagagcaag
atcaggcatgtccatgtgatcggcgccggtgcgatgggcggcgacattgcgtcgtggtgc
gcgcatcagggcctgcgcgtgacgcttgccgacatgcagccggcggcgattgcgaatgcg
atgaagcgcgcggcagatctgtttgcgaagatcgcccgcggccgcattgcccagcgcgac
acgcttgatcgtttgattccggacatgacgggagaaggcgcaaagcaggcggatctcatc
atcgaggccgtgccggagaagttgcagctcaagcaatcgatttatgccggccttgaaaaa
gtgatgcggccggacgccatcctcgcgaccaacacgtccagcattccgctcgaggagttg
cgcgcctcgctgcagcggccggagcgattgctcggcatccatttcttcaatccggtgtcg
cggctgcaactggttgaagtgatcagccacgatcaggtcgatcaggaggcgcttgcgacc
gcgatgaagttcgtcggtggaatcgatcgcctgccgctgccggtgaagagttcgccgggc
ttcctcgtcaaccgcgcgctgatgccgtatctgatggaagcgctgctgatgctcgacgag
aaggtggacaaactcaccatcgacgaggcggcggaaaagttcggcatgccgatgggcccg
atcgaactcgccgatcaggtcggcctcgatatctgtcttgcggtcggcgatgagttgcgc
gccaagcttggcgattccattccggttgcgcctgactggttgcgcgacaaggtcgcgaag
ggcgaactcggtcgcaagaccggacgcggattctacgaatggaaggacggccgcgtgcag
aagggccatgcccatgttcacgccacgccggaaatgaccgatcgccttgtgctgccgatg
tcgaacgtctgcgtcgcctgtttgcgtgaaggcatcgtcgacaatcccgatacggtggac
ggcgcgatgatcttcggcaccggctatgcgccgttccgcggcgggccgctcaactacgca
cgcgagcgtgggccggagaatgtcgccaacgcgctcttggtgctggcggagaaatacggt
gagcgcttcaagccggatgccggctgggcgacgtttcgctga
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