Afipia carboxidovorans OM4: OCA4_c29360
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Entry
OCA4_c29360 CDS
T01967
Name
(GenBank) TRAP transport system, substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OCA4_c29360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oco02000
]
OCA4_c29360
Transporters [BR:
oco02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
OCA4_c29360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
AEI04045
LinkDB
All DBs
Position
complement(3121809..3122795)
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AA seq
328 aa
AA seq
DB search
MFIRTGLLAIAQLALATQLVSAAQVWDLSLEYQPNSLPGETSRVFAEKLSELSGGAITVK
IHYGAALGFKSVDQFDAVGDGALKIASSFMPTWSGIDPLFLISTLPLLAQSPEDAARLYS
AVKPAMSNVLDKSNQVMLFVTPWPNNGIWAKKAIDDKASLKDLRVRTFDPNGTLTFRAAG
AAPIQLSWADVLAQLSTGGIDAVLTSADGGGAAKLWELLSHYTEVPYASPWQMVHMNKGI
FGKLSDQEKAWVRKAADEAERHGWKAVTVRVEHNYAEMRKHGMTVIDKPNDAAVATLSKA
GAELIKRWEQTVGPAGKEAIARYRGNKN
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtttattcgaacaggactgttggccattgctcaattggctcttgctacgcaacttgtg
agtgctgcccaggtttgggacctttcattggaataccagccaaactcgcttccgggagag
accagccgagtttttgcagagaagctctccgagttatctggtggtgccatcacagtgaaa
attcattatggcgcagcgttgggcttcaagtccgttgaccaatttgatgcggttggtgac
ggagcactgaagatcgcgagtagttttatgccgacatggagcgggattgatcccctcttt
ctgatttcaacactacctctactcgcccagtcgcctgaggatgctgcccggctttactcc
gcagttaagccagctatgtcgaatgtgcttgataagagtaaccaagtaatgctcttcgtc
acgccttggccaaataacgggatatgggcaaagaaggccatagacgacaaagcttcgctc
aaggatctccgcgttcgaacgtttgatccgaatggaaccttgacctttcgtgccgcggga
gctgcaccgatccagctgagttgggcggatgtattggctcagctctcaacgggcgggatc
gatgccgtcctgacatccgccgatgggggaggagcagcgaaattatgggagttgctgtct
cactataccgaggttccgtatgcgagcccatggcagatggttcacatgaataagggcata
ttcggcaaactaagcgatcaggagaaagcgtgggttcgcaaagcggctgatgaagcagag
cgtcatggatggaaggcagtgactgtacgcgtcgagcataattacgccgagatgcggaag
cacggcatgaccgtcattgataaaccgaatgacgctgccgtcgccactctctccaaggct
ggcgccgagttgatcaagagatgggagcaaactgtcggtcctgctggcaaagaagcaatt
gcccgatatcgaggcaacaagaattga
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