Afipia carboxidovorans OM4: OCA4_c29520
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Entry
OCA4_c29520 CDS
T01967
Name
(GenBank) putative recombinase
Organism
oco
Afipia carboxidovorans OM4
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Paralog
GFIT
Motif
Pfam:
Resolvase
Recombinase
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
AEI04059
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Position
3138414..3140036
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AA seq
540 aa
AA seq
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MTSAGKSVRCAIYTRVSTDAGLDQKFNSLDAQYDASEAYIRSQAHANWTLIKRRYDDGGF
SGGSTDRPALQKLLDDVRARKINVIVVYKVDRLTRSLADFAKLVELFDAHGVSFVSVTQQ
FNTTTSMGRLTLNVLLSFAQFEREVTAERIRDKIAASKRKGLWVGGMVPLGYALSDGKLS
IHQDEAKTVRLIFERYLELGSANRLVADLKTRGLTSKIRKLSSGAIRGGVPFTQGPLFYI
LRNRFYIGEVTFKGEVLPGPQPPLLERSLFEAVQAKLTEQWSHRTRARQKSEALLTGLLF
DDAGNRMIPTHATKNRVRYRYYISQPLQRGHSDDPVGSISRAPADQIEVLVTNAVRDRLT
ESGKWSQSLSEQNAVAAHIAKVEVRAKQLAVTLKATDPTPHYDHELAQRDDAGMVIVIPW
TKPPMRKFRDVIRPASASTRRTRPIRAERRVGLIRAIARGRQWLDEITSGRLTIEEIAVR
QKCSVRQINLTLSMAFLAPPLVKAAIEGRLPRGIGIAQLRDAPPEWSKQYVKLGLPMLQL
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcggctggcaaatccgtccggtgtgcgatctatacccgcgtctcgaccgatgcc
ggccttgatcagaaattcaactcgcttgacgcccagtatgatgcatccgaagcctatatc
cgcagtcaggcgcatgcgaactggacgctgatcaagaggcgctatgacgatggagggttc
tcgggcggatcaaccgaccgccctgcccttcaaaagttgctcgatgatgtcagggcacgc
aagatcaatgtcattgtcgtctataaggtcgaccgcctaacacgttcgctggccgacttt
gccaagctggttgaattgttcgacgctcatggcgtgtcattcgtctcggtgacccagcaa
ttcaatacgacgacatcgatgggtcgtttgaccctgaatgttctcttgtcctttgcccaa
ttcgaacgcgaggtcacagccgagcgtatccgcgacaagatcgccgcctccaagcgcaag
ggcttgtgggtcggaggcatggttccgctcggttacgcgctgagcgacggcaagctctcc
atccaccaggacgaagcaaaaaccgttcggctcattttcgaacgctaccttgaactgggc
agcgccaatcgcctggtcgctgatctcaagaccagaggactgacctccaaaattcgcaaa
ctctcaagcggcgccatccggggcggcgttccgttcacccaaggcccgctgttctacata
ctgcgcaaccgattctatatcggcgaggttacattcaagggcgaggtcctgcccggacca
caaccgcctttgcttgagcgatccctgttcgaggccgtccaagccaagctcaccgagcaa
tggtcccatcgaaccagggccaggcaaaaatccgaagcgcttctcacgggattgctgttc
gacgatgctggcaaccgaatgatcccaactcatgcaacgaagaaccgcgtgcgctaccgc
tactatatttcccaaccgctgcaacgcggtcattccgatgatccggtggggtccatatct
cgcgcccccgcagaccagatcgaggtgctggtcaccaacgccgtacgagaccgattgacg
gaatctggcaaatggtcacagtcgctctcggagcaaaatgccgttgcagcccatatcgca
aaagtcgaggttcgtgccaaacaattggctgttacccttaaggcgaccgatccgacgcca
cattacgatcacgaattggctcaacgcgacgatgctggcatggttatcgtgattccatgg
accaagccgccgatgcgcaagttccgagacgtgatccgacccgcatccgcttcgacccgg
cgaacacgaccgatccgcgctgagcgtcgcgtaggcctgatccgtgccattgcgcggggt
cggcaatggttggacgagatcacctccgggcgattgaccatcgaagagattgcggtcagg
caaaaatgcagcgttcggcaaatcaatctgacgctgtcgatggctttcctcgcgccgcca
ttggtcaaggccgcaatcgaaggtcgcctgccccgtggcataggcatcgcgcaactacgc
gatgcaccgcccgaatggtcgaaacagtatgtgaagcttggattgcccatgcttcagtta
tga
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