Afipia carboxidovorans OM4: OCA4_c30050
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Entry
OCA4_c30050 CDS
T01967
Name
(GenBank) ABC transporter, putative high-affinity branched-chain amino acid transport substrate-binding-protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco02010
ABC transporters
oco02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
OCA4_c30050
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OCA4_c30050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oco02000
]
OCA4_c30050
Transporters [BR:
oco02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
OCA4_c30050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
DUF535
Motif
Other DBs
NCBI-ProteinID:
AEI04111
LinkDB
All DBs
Position
complement(3196474..3197823)
Genome browser
AA seq
449 aa
AA seq
DB search
MTKINGFYNSDISRRAMLRGSAGLAGGLALTGGLTMPVFADNPAIGTYPAGSSGSTVTFG
VAVPRTGTYAVQGEDELKGWELAVEHLNTGHELVKKLSPKTSKGVLGKEIKLVVADSGAK
PNIAVQAQQRFITENKVVLMTGSTSSAVAVALNKLAQREKVMYVAGISGSNDTTGKDCVR
YGFRQCFYGEMAANAIGPTIIKTFGKNKKAAYLTPDYTYGHTTTASVENYLKGQGWTTVT
NQVSPLGAPDYSSYLLNVANSGADVLINVNWGHDCVLSTQQAKQFGIFDKMKLVVPYQVP
FLAREVGGGLLAGVYAATDYWWTLEEQFPLAKMFNDSFEKKYGYKPEWGAENAYMGFVHW
ARMAEEAKSFYPPDIIKAYEKGETIPSLVGDVHYRPEDHQCVRPVIIVRGKKPSDMKNKE
DYYEIVEIVPGDKVIQKPDAFGCKLGDYT
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaataaacggattctacaactctgacatttctcgccgtgcgatgctgcgcggg
agcgccggtctcgctggcggtcttgctctgacgggcggactgacgatgccggttttcgcg
gataaccctgcgatcggcacctatcccgccggctcctccggaagcacggttacgttcggc
gtggccgtgccgcgcaccggcacttatgccgttcagggcgaagacgaactgaagggctgg
gagctcgcggtcgagcacctcaacacgggtcacgaactcgtcaagaagctgtcgccgaag
acctcgaagggcgttctcggcaaggaaatcaagctggtcgtcgccgacagcggcgccaag
ccgaacatcgccgtgcaggcacagcagcgcttcatcaccgagaacaaggtggtgctgatg
accggttcgacctcgtcggcggtcgcggttgcgctcaacaagctcgcccagcgcgagaag
gtgatgtacgtcgccggcatctccggttcgaacgacaccaccggcaaggactgcgtccgc
tacggcttccgccagtgcttctacggcgaaatggcggcgaacgcgatcggtccgaccatc
atcaagaccttcggcaagaacaagaaggccgcctatctcacgccggactacacctatggt
cacaccaccacggcgtcggtcgagaactacctgaagggtcagggctggaccacggtcacc
aaccaggtctcgccgctcggcgcccccgactactcctcgtacctcctgaacgtcgcgaac
tccggtgcggacgttctcatcaacgtcaactggggtcatgactgcgtgctgtcgacccag
caggcgaagcagttcggcatcttcgacaagatgaagcttgtcgtgccttaccaggtgccg
ttcctcgcgcgcgaagtcggcggcggtctgctggccggcgtctatgcggctaccgactac
tggtggaccctggaagagcagttcccgcttgccaagatgttcaacgactccttcgagaag
aagtacggctacaagccggagtggggtgcggagaacgcttacatgggcttcgtgcactgg
gctcgcatggccgaggaagcgaagagcttctatccgccggacatcatcaaggcctacgag
aagggtgagaccattccttcgctggtcggcgatgtgcactaccggcccgaagatcaccag
tgcgtgcgtccggtcatcatcgtccgcggcaagaagccgtccgacatgaagaacaaggaa
gattactacgagatcgtagaaatcgtccccggcgacaaggtgatccagaagccggatgcg
ttcggttgcaagctcggcgattacacctga
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