Afipia carboxidovorans OM4: OCA4_c30500
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Entry
OCA4_c30500 CDS
T01967
Name
(GenBank) putative transcriptional regulatory protein
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
oco
Afipia carboxidovorans OM4
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oco03000
]
OCA4_c30500
03036 Chromosome and associated proteins [BR:
oco03036
]
OCA4_c30500
Transcription factors [BR:
oco03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
OCA4_c30500
Chromosome and associated proteins [BR:
oco03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
OCA4_c30500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_13
TetR_C_24
TetR_C_4
TetR_C_17
TetR_C_11
TetR_C_7
TetR_C_29
SlmA-like_C
TetR_C_15
Motif
Other DBs
NCBI-ProteinID:
AEI04156
LinkDB
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Position
complement(3244257..3244853)
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AA seq
198 aa
AA seq
DB search
MISRPAYLSAEERCEVTVETVIDLAAEQNPADITTGAIAKRMGVTQGALFRHFPSKDAIL
QAVMERLSERLLARINKATSSLGALEAAFTAHIEFISEHPGVPRMLFGELQRAEQTVARR
MAPTLIQRYGERLGRLIAEGKERGELAPTLEETVAATLFIGTIQGLVMQSLIVGNVKRFR
ASAPGAFALYRRAVEAAR
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgatctctcgaccagcctacctttccgcggaagagcgatgtgaggtgacggtcgaaacc
gtcatcgacctcgctgccgagcaaaaccccgcagacatcaccaccggggcgatcgccaag
cggatgggagtgacccagggggctttattcaggcacttcccatccaaggacgccattctc
caagccgtgatggagaggctctctgaacgcctgcttgcacggatcaataaggcgacttcc
tcgcttggcgcactggaggctgcgttcacggcgcatatcgagttcatctcggagcaccca
ggcgtacctcggatgctgttcggagaattacagcgcgccgagcagaccgtggccaggcgt
atggcaccgaccttgatccagcgttacggcgagcgtcttggacggctcattgctgagggc
aaggagcgtggcgaactggcacccactctggaagagacggtcgccgccacactgtttatc
ggcacgatccagggccttgtcatgcagtccctcatcgtcggtaacgtcaaacgcttccgc
gccagcgcgccaggagcgttcgcgttgtatcgacgcgcggttgaggcggcgagatga
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