Afipia carboxidovorans OM4: OCA4_c30790
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Entry
OCA4_c30790 CDS
T01967
Name
(GenBank) putative site-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco00270
Cysteine and methionine metabolism
oco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
OCA4_c30790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oco03000
]
OCA4_c30790
03032 DNA replication proteins [BR:
oco03032
]
OCA4_c30790
03036 Chromosome and associated proteins [BR:
oco03036
]
OCA4_c30790
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
oco02048
]
OCA4_c30790
Enzymes [BR:
oco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
OCA4_c30790
Transcription factors [BR:
oco03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
OCA4_c30790
DNA replication proteins [BR:
oco03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
OCA4_c30790
Chromosome and associated proteins [BR:
oco03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
OCA4_c30790
Prokaryotic defense system [BR:
oco02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
OCA4_c30790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
AEI04185
LinkDB
All DBs
Position
complement(3269551..3270627)
Genome browser
AA seq
358 aa
AA seq
DB search
MHDLALSSFGLSAGAGSACLLGLSLCSGAGGLDLGVAIACPEYRAMGYVERDAYAAAILV
ARMEDAALDHAPVWDDIATFDGRPWRGTIDIVTAGYPCQPFSVAGKRRGTDDPRHLWPHV
GRIIGECKPSFVFLENVAHHLRRGFPEVATGLVDMGYRLAAGLFTAAEVGAPHRRERLFI
LAHREGDDLADPARLLRDPLERRQPHGDDAVVANAADRQFPLSRWRTKARKRFGRSGAGL
ADTDGQRRLQAECWQPENGRPDPCSRNMDDADGSRSQGWSNESCQHAGERTAWPPGPHNA
DGWQRYLRAAPDLEPAVRRGADGLAHRVDRLRLCGNGVVPLVAAHALRTLAAELLVDD
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacctggctctatcttccttcggtctgtctgccggagccggaagtgcttgcctg
ctcggcctttcgctgtgctccggcgcgggtggtctcgatctcggagtcgctatcgcctgc
cccgaatatcgggctatgggttacgtcgagcgggacgcttatgctgcggctatcctcgtg
gcgcggatggaagacgcggccctggatcacgcgcctgtctgggacgacattgccacattc
gacggccgcccgtggcgtggaacgatagacatcgtcactgcgggctatccgtgccagccg
ttttccgtcgccggcaagcgccggggtacggacgatccgcgccacctctggccgcatgtc
gggcgtatcatcggcgaatgcaaaccatccttcgtcttcctcgagaatgtcgcccatcat
ctccgccgtggttttcccgaggtcgccacaggactggtcgacatgggctaccgccttgcg
gcaggtctcttcacggcggcggaagtcggtgcgccccatcgacgcgagcggctattcatc
ctcgcccatcgcgagggcgacgacctggccgaccccgcgcgcctgctccgggacccgctc
gagcggcggcaaccgcacggagatgatgcggttgtggccaacgccgcagaccgacagttt
ccgctgtcgcggtggcgaacgaaagcacgaaagaggtttggacggtctggcgcgggattg
gccgacaccgatggccaacgacggttgcaagccgagtgctggcaaccggaaaacggcaga
cctgacccatgcagccggaatatggatgacgccgacggctcgcgatcacaaggatggagc
aacgagtcttgccaacacgccggtgaacggactgcttggccgccaggtcctcacaacgcc
gatggttggcagcgatacctgcgagcagcgccggaccttgaacccgctgttcgtcgaggc
gctgatgggctggcccaccgggtggaccggcttcgcctctgtggcaacggcgtggtccca
ctggttgccgcgcatgcgcttcgaactctcgcagctgagctgctggtcgacgattga
DBGET
integrated database retrieval system
