Afipia carboxidovorans OM4: OCA4_c31380
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Entry
OCA4_c31380 CDS
T01967
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase LysA
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco00300
Lysine biosynthesis
oco00470
D-Amino acid metabolism
oco01100
Metabolic pathways
oco01110
Biosynthesis of secondary metabolites
oco01120
Microbial metabolism in diverse environments
oco01230
Biosynthesis of amino acids
Module
oco_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OCA4_c31380 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OCA4_c31380 (lysA)
Enzymes [BR:
oco01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
OCA4_c31380 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AEI04238
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Position
complement(3319644..3320912)
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AA seq
422 aa
AA seq
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MHHFQYRNGVLHAEDVDIGRLAEQLGTPFYCYSTATLERHYRVFTEAFAGVDTLVCYAMK
ANSNQSVLRTLARLGAGADVVSGGELMRARAAGIPADKIVFSGVGKTEGELRQALAENIL
CINVESEPELDLLSRVADETGQVARVSLRLNPDIGAGGHAKISTGKSENKFGIPLSRARG
VYARAAKLPGIRLTGVDMHIGSQITDLAPLEAAFALLVDFVRTLRADGHAIDHIDFGGGL
GIPYESDLPVPPTPAAYAEVVKRVTRGLDDCRLLFEPGRMIVGNAGILVSRVIYVKHGEG
RNFVIIDAAMNDLIRPTLYEAHHDILPVREAAPNDPSLVADVVGPVCETGDYLALGRRLP
ALAAGDLVAVMSSGAYGAVQAGTYNTRPLVPEVLVKGGDYAVVRPRVDAAQLIALDQIAP
WL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacttccaatatcgtaacggcgttcttcatgccgaggacgtcgatatcggccgt
ctcgccgaacaactcggcacgccgttctattgctattcgaccgcgacgctggagcggcac
taccgcgtcttcactgaagccttcgctggggtcgatacgctcgtctgctatgcgatgaag
gcgaactccaatcagtcggtgctgcgcacgctggcgcggctcggcgcgggcgccgacgtc
gtctccggcggcgaactgatgcgcgcgcgggcggccggcattcccgccgacaagattgtg
ttctccggcgtcggcaagacggaaggcgaactgcgtcaggcgcttgctgaaaacattctc
tgcatcaacgtcgagtccgagcccgagcttgatctgctctcccgcgtggcggatgagacg
ggacaggtcgcgcgcgtctcgctgcggctcaatcccgatatcggcgcgggcggtcacgca
aaaatctcgaccggcaagtcggagaacaagttcggcattccgctgtcgcgtgcgcgcggt
gtgtatgcgcgggcggcgaagctgccgggcattcggctcaccggcgtcgatatgcacatc
ggcagccagatcaccgatcttgcaccgctcgaagccgcgttcgccttgctggtcgatttc
gtccgcacgctgcgcgccgacggccacgccatcgaccatatcgatttcggcggcggtctc
ggcatcccctacgagagcgacctgccggtgccgccgacccccgccgcctatgccgaggtg
gtgaagcgcgtcaccagggggctcgacgactgccgtctcctgttcgagccggggcggatg
atcgtcggcaatgccggaattctcgtcagccgcgtgatctatgtgaagcacggcgaagga
cgcaattttgtcataatagatgcggccatgaacgacctcatccggccgacgctatatgag
gcccatcacgatatcctccccgtccgggaagcggcgccaaatgacccctcgctggtcgcg
gatgtggtcggaccggtctgcgaaaccggcgattatctggcacttggccgccgcctgccg
gcacttgcggccggcgaccttgtcgcggtgatgtcctcgggcgcttacggcgcggtccag
gccggcacctacaacacccggccgctggtgccggaggttctggtcaagggcggtgactat
gccgtggtccggcctagggtcgatgccgcacaattgatcgcactggatcagatcgcccca
tggctgtga
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