Afipia carboxidovorans OM4: OCA4_c31520
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Entry
OCA4_c31520 CDS
T01967
Name
(GenBank) hypothetical protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OCA4_c31520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oco03400
]
OCA4_c31520
Enzymes [BR:
oco01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
OCA4_c31520
DNA repair and recombination proteins [BR:
oco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OCA4_c31520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AEI04252
LinkDB
All DBs
Position
3331725..3332597
Genome browser
AA seq
290 aa
AA seq
DB search
MLIRSDMTLYLNTQADLDRAIAGLIVADPALAAIAEIAGPPALRRRTPGFAGLAAIICGQ
QLSTHAAAAIWKRVSEAFDPFHHERVRLARADRLARLGLSAAKIKTLKALAREIAAERLD
LDVLGQQEADLAHTALTALHGIGPWTADIYLLFCLGHGDAWPNGDLAVQEAMRIGLDLEA
RPSAREAATIAERWRPWRGAAAHLWWAYYHAVKRREGILPSDDADSIASKPRPRPAAVPR
VTRGAAKAAAKTASQRPAKPRTKAPPKAPLKPRSKAVHAVKPATRTQRKK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgctgattcgaagcgacatgacactatacctgaacacccaagctgacctcgaccgcgcc
atcgccgggctcattgtcgccgacccggcgctcgccgccatcgcggagatcgcaggcccc
ccggcgctgcgccggcgcacgccgggatttgccgggcttgccgccatcatctgcggccag
cagctctcgacgcatgccgccgccgcgatctggaaacgggtgagcgaggccttcgatcca
ttccatcacgagcgcgtccgcctagcgcgcgccgaccggctggcgcggctcggtctctcc
gccgccaagatcaagacgctgaaggcgctggcgcgcgagattgcggcggaacggctcgac
ctcgacgtgctgggacagcaggaggctgatctcgcccacaccgcgctcaccgcgctgcat
ggcatcggcccatggacggcggacatctacctcctgttctgtcttggccacggcgacgcc
tggccgaacggcgacctcgccgtgcaggaggcgatgcggatcgggctcgacctagaggcg
cggccgagtgcccgcgaggcagctacgatcgcggaacgctggcggccctggcggggcgcc
gcggcgcatctgtggtgggcctattatcacgcggtgaagcggcgcgagggcatcctcccc
tcggacgacgccgattccatcgcatcgaagccacgcccccgccctgcggctgttccccgg
gtgaccagaggagcggcaaaggcagcggcaaagaccgcctcgcagcggcccgcgaaacca
cgtaccaaagcgcctcccaaggcgcctctcaagccgcgttcaaaggcggttcacgcggtg
aaacccgccacgcggacccagcggaaaaaataa
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