Afipia carboxidovorans OM4: OCA4_c33040
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Entry
OCA4_c33040 CDS
T01967
Symbol
priA
Name
(GenBank) primosomal assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OCA4_c33040 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oco03400
]
OCA4_c33040 (priA)
Enzymes [BR:
oco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OCA4_c33040 (priA)
DNA repair and recombination proteins [BR:
oco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OCA4_c33040 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
TrwB_AAD_bind
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AEI04400
LinkDB
All DBs
Position
complement(3484001..3486232)
Genome browser
AA seq
743 aa
AA seq
DB search
MRYSHRAVYPLLNPTPDALMPRRVVDVLVPVALDQTYSYSVPEGLDLTVGDVVTVPLAAR
EVTAVVWAENPNPDPRLHNRLKDISGKLDVPPLREELRRFVDWVSTYTLASRGMVARMTL
RMGEHLGPERVRLGVRLVGAPPARMTAARARVLDLLSDGLLRPKSEAAKEAGVSVSVIEG
LVDEGTLTVEPMPREKPMQPPDPAFAEPDFSPEQSAAAAEMHALAQKDDFAVALLDGVTG
SGKTEVYFEAVAEIIRKGRQALILMPEIALTGQFLDRFSQRFGVRPIEWHSELTPRTRAR
NWLAVANGEAQIVVGARSALFLPYADLGLIVVDEEHDQAYKQSDGAHYHARDMAVVRGHI
AKIPVVLSSATPSVETEVNARTGRYTRIALPSRFGGQHMPQIEAIDLRREGPPRGRFISP
PLAEAVKFAVERREQALLFLNRRGYAPLTLCRACGHRFSCNICDAWLVDHRFRQRLVCHH
CGFSMPRPHQCPQCGAEESLAAIGPGVERLQEEVANLFPEARTMVLSSDLITDIETMRSE
LNEIAEGRVDIIIGTQLVAKGHNFPRLNLVGVVDADLGLGNGDPRAAERTFQLLNQVIGR
AGREQGRGVGYLQTHQPEHPVMKALVASDRKAFYDSEIEARERAAYPPFGRLAALIIAAA
NRPDAEGFARKLVGLAPREERVIVLGPAEAPLAVIKGRHRFRILVKSQRVFDLSGYLRTW
LAAAPKTKGSLTLEVDIDPQSFL
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
ttgcgatactcacatcgggccgtttatcctttgttaaatcccacgccggatgccctcatg
cccaggcgcgttgtcgacgtccttgtcccggtggcgctcgaccagacttattcctacagc
gtgccggagggtctcgacctcaccgtgggcgatgtcgtgacggtaccgctcgccgcgcgc
gaggtgacggccgtggtctgggccgaaaaccccaatcccgatccgcgcctgcacaaccgc
ctgaaggatatcagcggcaagctcgacgtgccgccgttgcgcgaggaactgcgtcgcttc
gtcgattgggtctcgacctacacactcgcctcgcgcggcatggtggcgcggatgacactg
cgcatgggtgagcatcttggccccgagcgcgtgcgtcttggcgtgcggcttgtgggtgcg
ccgcccgcgcggatgacggcggcgcgcgcccgtgtgctcgatcttctcagtgacggcttg
ctgcgcccgaagtcggaagcggcaaaggaagcgggcgtcagcgtctcggtgatcgaaggc
cttgtcgatgaaggcacgctcacggtcgagccgatgccgcgtgaaaaaccgatgcagccg
ccggaccctgcgttcgcagagccggatttctcacccgagcagagcgcggcggcggcggag
atgcatgcgctcgcgcagaaggatgacttcgcagtggcgttgctcgatggcgtcaccggt
tcgggcaagaccgaagtctatttcgaggcggtcgccgagatcatccgcaagggacggcag
gcgctgatcctgatgccggagatcgcgctgaccggacaatttctcgaccgcttctcgcaa
cgcttcggcgtgcggccgatcgagtggcattccgagctcacgccgcgcacgcgcgcgcgt
aactggctcgcggtggcgaatggcgaagcgcagatcgtggtcggcgcgcgctccgcgctg
tttttaccttatgccgatctcggcctcatcgtcgtcgatgaggagcacgaccaggcctac
aagcagagcgacggcgcgcattatcatgcccgcgatatggcggtggtgcgggggcacatc
gcgaaaattcccgtggtgctgtcgtcggcaacgccatcggtcgaaaccgaagtgaacgcc
cgcaccggccgctacacgcgcatcgcgctgccgtcacgtttcggcggccagcatatgccg
cagatcgaggcgatcgatctgcgtcgcgaagggccgccgcgcggccgcttcatttcgccg
ccgcttgcggaggcggtgaagttcgcggtggagaggcgcgagcaggcgctcctctttctc
aaccgccgcggctatgcaccgctgacgctatgccgtgcctgcggccatcgcttctcgtgc
aacatctgcgatgcgtggctggtcgatcatcgctttcgccagcggcttgtctgccatcac
tgcggcttctcgatgccgcgtccgcatcagtgcccgcaatgcggcgcggaggaatcgctc
gccgcgatcggccccggcgtcgagcggttgcaggaagaagtcgcgaaccttttccccgaa
gcgcgcaccatggtgctgtcgagcgatctcatcaccgacatcgagaccatgcggtcggaa
ctgaacgagattgctgaggggcgcgtcgatatcatcatcggcacgcagctcgtggcgaag
gggcacaacttcccgcgcctcaacctcgtcggcgtggtcgatgccgatctcggccttggc
aacggcgatccacgcgcggccgaacgcacttttcaattgctcaatcaggtgatcgggcgt
gcggggcgcgagcaggggcgaggcgttggctatttgcagacgcatcaaccggaacacccg
gtgatgaaggcgctggtcgcctccgatcgcaaggcgttctacgacagcgagatcgaggcg
cgggagcgcgcggcctatccgccgttcggacggctcgcggcactcattattgctgcggcg
aaccggccggatgcggaaggctttgcgcgcaagctcgtgggtcttgcgccgcgcgaggaa
cgggtgatcgtgctggggcctgcggaagcgccgctcgccgtcatcaaggggcgtcaccgc
tttcgcattctggtgaagtcgcagcgcgtgttcgacctgtcgggttatctgcggacctgg
ctcgcggccgcgccaaagaccaaaggcagcctcacgctcgaagtcgatatcgacccgcag
agtttcctctag
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