Afipia carboxidovorans OM4: OCA4_c33050
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Entry
OCA4_c33050 CDS
T01967
Symbol
xerC
Name
(GenBank) tyrosine recombinase XerC
KO
K03733
integrase/recombinase XerC
Organism
oco
Afipia carboxidovorans OM4
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oco03036
]
OCA4_c33050 (xerC)
Chromosome and associated proteins [BR:
oco03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
OCA4_c33050 (xerC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_attach
Motif
Other DBs
NCBI-ProteinID:
AEI04401
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Position
3486314..3487300
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AA seq
328 aa
AA seq
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MAKRTSKPQAQPDPGSIALPATGDFQAEVARWLAHLKSERRLSPKTLEAYERDLRQCIGF
LAEHWGKPVSLASFAGIEATDVRAFMASRRSHDVAGRSLMRALAGLRSFGRFLEREGKGK
VGALSAIRAPKISKSLPKPLAVSAARHLTEAEIRAGEDRPPWIWARDAAVMALLYGSGLR
ISEALGLARRDIPEPGRGDVITVTGKGNKTRMVPVLQAVLDAVQDYIAQCPYELSPDKPV
FVGARGGPLSPRIIQLTMERLRGALGLPDSATPHALRHSFATHLLSRGGDLRAIQELLGH
ASLSTTQIYTGIDAERLMDVYQSAHPRA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcgcacatcgaaacctcaagctcagcccgaccccggcagcatcgcgctgcct
gcgaccggcgattttcaggccgaggtcgcacgctggcttgcgcatttgaagagcgagcgg
cggctgtcgcccaagacgctggaagcctatgagcgtgatctgcgccagtgcatcggcttt
ctcgcggaacattggggcaagccggtttcgctcgcttcctttgccgggattgaagccacc
gacgtgcgcgccttcatggcgtcgcgccgcagccacgatgtcgccggccgttcgctgatg
cgtgcgctcgcagggctgcgctcgttcgggcgctttctggagcgcgaaggcaaaggcaag
gtcggcgcactgtcggcgatccgtgcgccgaagatttccaagagcctgccgaagccgctc
gcggtgtcggctgcacgccatctcaccgaagccgagatccgcgccggcgaggatcgtcca
ccgtggatctgggcgcgcgatgccgccgtgatggcgctgctctatggctcgggcctgcgc
atttccgaagcgctcggccttgcgaggcgcgacattcccgaaccaggacgcggcgacgtc
atcactgtgacgggtaaaggcaacaagacccggatggtgccagtgctgcaggccgtgctg
gacgccgtgcaggattacatcgcgcagtgcccctatgagctttcgccggacaaaccggtg
ttcgtcggcgcgcgcggcgggccgctttccccgcgcattattcagttgaccatggaacgg
ctccgcggcgcgctcggcctgccggacagcgccaccccgcacgcgctgcgtcactcgttt
gcgacacatttattatcgcgcggcggcgacctgcgtgcgatccaggaactgctcggccac
gcctcgctctcgaccacccagatctataccggcatcgacgccgaacggctgatggacgtc
taccagagcgctcacccccgcgcctga
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