Afipia carboxidovorans OM4: OCA4_c33360
Help
Entry
OCA4_c33360 CDS
T01967
Name
(GenBank) ABC transporter ATP-binding/permease
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
oco
Afipia carboxidovorans OM4
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oco02000
]
OCA4_c33360
Transporters [BR:
oco02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
OCA4_c33360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_30
ABC_ATPase
AAA_21
RsgA_GTPase
AAA_29
AAA_16
AAA_25
AAA_5
AAA_23
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AEI04431
LinkDB
All DBs
Position
complement(3521519..3523327)
Genome browser
AA seq
602 aa
AA seq
DB search
MSETRGKITDDPYGALQVIKRLVAEQAVVYWRRYLFVLVMMAIGAGASAGSAYLFGKVIN
EAYVYRSINGIVMLSAAVIGLFTAKGIATYLQQVMLSRISNAILANNQRKLFSKLMQESL
AFYSKSHSSEYLNRLSAGAASITQVLSLIITSAGRDLLTLIGLVAVMVSQDPFLSLLSLI
VVPPMFLFVRKIVRRIKSLAAGQFMGTAYIMEAVQESLQGIRTVKAFTLESAMQERVDRS
IAEVESFSNKMAKVANRSGPLMEMLGGIAISAALMYGGYRVIATNAAPGQFVSFITAFLL
AYEPAKRLARLNIDLNSALMGASMLLEIVDKPATEPDDSDKPALALTQAQIEFRDVTFAY
RPDQPVLKQMNFIAEPGKVTALVGPSGGGKSTILSLLLRFYEADEGAVLIDEQVISDYSR
SSLRQQTAYVGQDVYLFRGTVRENIAFGKPGATDEEIAAAAEAACAHDFITGFPLGYETP
VGEHGTQLSGGQRQRIAIARALIKDAPIILLDEATAALDSESEKYVQEAMARLCKGRTTI
VIAHRLHTIMHADTILVVENGIIVESGRHDDLLQKNGRYANFFRLQQREADKATPLRAKA
DG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagacccgcgggaagatcaccgacgatccctatggggctctgcaagtcatcaag
cgacttgttgctgagcaggcggtcgtctactggcggcgttatctgttcgtgcttgtcatg
atggcgatcggcgcgggcgcgagcgcgggctccgcttatctgttcggcaaggtcatcaac
gaggcctatgtctatcgcagcatcaacggcatcgtgatgctgtcggccgccgtcatcggc
ctgttcaccgccaaaggcattgccacctatctgcagcaggtgatgctgtcgcggatcagc
aatgcgattcttgccaacaaccagcgcaagctgttttcgaaattgatgcaggaaagcctt
gcgttctattcgaagtcccattcgtccgaatatctgaaccggctctccgccggcgcggcc
tcgatcacgcaggtgttgtcgctcatcatcacgagcgcgggcagggatctcctgacgctg
atcggccttgtcgccgtaatggtgtcgcaggacccgttcctgtcgctgctgagcctcatc
gtcgtgccgccgatgtttctgttcgtgcgcaagatcgtgcggcggatcaagagcctcgcg
gccggccagttcatgggcacggcctacatcatggaagccgtgcaggaatcgctgcagggc
atccgcaccgtgaaagccttcacgctcgaaagcgcgatgcaggagcgagtggatcggagc
atcgcggaggttgagtccttttcgaacaagatggcgaaggtcgccaaccgttcgggcccg
ttgatggagatgctgggcggcatcgcgatctcggcggcgctgatgtatggcggctatcgc
gtgatcgccaccaatgcggcaccggggcagttcgtatcgttcatcaccgcgttcctgctg
gcctatgagccggcgaagcggcttgcgcgcctcaacatcgatctgaacagcgcactgatg
ggcgcgagtatgctgcttgagatcgtcgacaagcccgccaccgaaccggacgacagcgac
aagccagcgcttgctctgacgcaggctcagatcgagtttcgtgacgtgactttcgcttat
cggccggaccagcctgtgctcaagcagatgaatttcattgctgagcccggcaaggtgacg
gctctggtcggcccctcgggcggcggaaaatcgacgattctgtcgttgctcctgcgcttc
tatgaagccgatgagggtgcagtcctgatcgacgagcaggtcatctcggactattcgcga
agctcgctgcgccagcagaccgcttatgtcggacaggatgtctatctgttccgcggcacc
gtccgggagaatatcgctttcggaaagccgggtgcgaccgatgaggagatcgcggccgcg
gcggaggccgcctgcgcccatgatttcatcacgggctttccgttgggctatgaaactccg
gtgggcgagcacggcacgcagctgtccggcggccagcgccagcgcatcgcgatcgcacgg
gcactgatcaaggatgcgccgatcatcctgctcgatgaggccacggccgcgctcgattcg
gaatcagagaaatatgtgcaggaggcgatggcgcgcctgtgcaagggccgcaccactatc
gtcatcgcccatcgccttcataccatcatgcatgccgatacgattctggtggtggagaac
ggcatcatcgtcgagtcgggccgccacgacgatctgctgcagaagaatggccgctacgcc
aatttcttccgtctgcagcagcgcgaggccgacaaggccacgccgctgcgtgcaaaggct
gatggatag
DBGET
integrated database retrieval system
