Afipia carboxidovorans OM4: OCA4_pHCG3B00530
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Entry
OCA4_pHCG3B00530 CDS
T01967
Symbol
hoxA
Name
(GenBank) hydrogenase transcriptional regulatory
KO
K19641
two-component system, NtrC family, response regulator HupR/HoxA
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OCA4_pHCG3B00530 (hoxA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
oco02022
]
OCA4_pHCG3B00530 (hoxA)
Two-component system [BR:
oco02022
]
NtrC family
HupT-HupR (hydrogenase synthesis regulation)
OCA4_pHCG3B00530 (hoxA)
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
Mg_chelatase
AAA_2
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AEI04499
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Position
pHCG3B:complement(54006..55505)
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AA seq
499 aa
AA seq
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MADTPLPAILVVDDEHLSVEAIKRTLEDDFEVFTATSGAEALSILENQWIQLVLCDQRMQ
GMSGLEVLSEVRRRWPEVLRVIITGYTDPNDIIDLVNKAGIYHFISKPWHPEELLLVLKN
GTQLYKLQREHDRLSVELKLLGPSVQNRLDEQRRQLREGFNFDNIVRSPVSPLNAACDMA
ARIAGFDVPALILGETGTGKELIARAIHYCSLRSDKPFHAVNCGAIPSELLESELFGHRK
GAFTGAHAHRIGLLEQAHEGTVFLDEIGDIPQAFQVKLLRFLQEGEIRPVGSNSTLRVDV
RVIAATNRDIAREAAAGKFREDLYYRLAISPISIPPLRERICDVPSLANSLLERVTARHD
IKISGFTDEALDRLCAYPWPGNVRELENQITRMVILAEGRILSADLIEPHILRADGAQSP
PEPLIDRFIGEGGLLRDRVERMEARIIRETLIRNRGNKSRAAEELGLSRVGLRAKLLRYE
IEEPVKLSLISGDAPDDDP
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggccgatactccgcttcccgccattctcgttgtcgacgacgaacatctttccgtcgaa
gcgatcaagcgaacgcttgaggacgatttcgaggtcttcaccgccaccagcggcgcggaa
gctctctccattctcgagaatcaatggatccagctcgtcctgtgcgatcagcgcatgcag
ggaatgtccggcctcgaggttctcagcgaggtgcgccggcgctggccggaggtgctgcga
gtcatcattacgggatacaccgatcccaacgacatcatcgatctcgtcaacaaggcgggg
atctatcacttcatttcaaagccctggcatccggaagagctgctgctggtgctcaaaaac
ggcactcaactctacaaacttcagcgtgaacacgatcgtctttcggtcgaactcaagctg
cttggcccatcggtgcagaaccgtctcgatgaacagcgccgtcagcttcgcgaaggattc
aatttcgacaacatcgttcgcagccctgtctcgcccttgaatgcggcttgcgatatggcg
gcgcgcatcgccggtttcgacgtgcccgcgctgattctcggcgaaaccggcaccggcaag
gaattgatcgcccgcgcgatccattattgcagcctgcgatccgacaaaccattccacgcc
gtcaattgcggcgcgattccttccgagcttctcgaaagcgaattgttcggtcatcgcaag
ggggctttcaccggcgcacatgcgcatcgtatcggcctgctcgagcaggcccatgaaggc
accgtattcctcgatgaaatcggtgacattccccaggcttttcaggtcaagttgctgcgt
ttcctgcaagaaggcgaaatccgtcctgtcggcagcaacagcacgctgcgggtcgatgtc
cgcgtcatcgcggccaccaatcgcgacatcgcgcgcgaggcggcggccggaaaattccgc
gaagacctctactatcgccttgccatctctccgatttccattcctccgcttcgcgaacgg
atttgcgacgtaccctcgctcgcgaattccctgctggagcgcgtgaccgcgcggcacgac
atcaagatttccggattcacggacgaagcgctcgaccggctttgcgcctatccctggcca
ggcaacgtccgcgagcttgaaaaccagatcacgcgaatggtcatccttgcggaaggccgg
atattgagcgccgacctgatcgagcctcacatcctgcgtgccgacggagctcaatctccg
ccggaaccgctgatcgatcgcttcatcggcgaaggtggacttttgcgcgaccgcgtcgaa
cggatggaagctcgcatcatccgcgagacattgatccgcaaccggggcaacaaatcgcgc
gcggcggaagaactcggcctgtcgcgcgtcggcctgcgcgccaagctgctgcgttacgaa
atcgaggagccggtgaaactgtctctgatcagcggggatgctcccgacgatgatccgtag
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