Afipia carboxidovorans OM4: OCA4_pHCG3B01140
Help
Entry
OCA4_pHCG3B01140 CDS
T01967
Symbol
traM
Name
(GenBank) transcriptional repressor
KO
K20272
TraR antiactivator
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OCA4_pHCG3B01140 (traM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prok-TraM
Motif
Other DBs
NCBI-ProteinID:
AEI04557
LinkDB
All DBs
Position
pHCG3B:120992..121318
Genome browser
AA seq
108 aa
AA seq
DB search
MDAMVFKKEDHTLSNADTATAMEALIEPLSDDEIEKLTIEAIRDYRSALDQAECAHNAWL
ASREKAAPATVHALHGEYVRQMLAHSAKQFLVATLIERLGYVPVVPVD
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgatggttttcaagaaagaagatcacacactcagcaatgctgacaccgcaact
gcgatggaggcgctcatcgagccgctgtctgacgatgagatcgaaaagctgacgatcgaa
gcgatacgcgactatcgctctgcgctcgatcaagccgaatgcgcccataatgcgtggctg
gcgagccgcgagaaagctgcgccagcgaccgttcatgcactccacggagagtacgtgagg
cagatgttagcgcatagtgctaaacagtttttggtggcaacactgatcgagcgtcttgga
tatgtaccggtcgtgccagtcgactaa
DBGET
integrated database retrieval system
