KEGG   Afipia carboxidovorans OM4: OCA4_pHCG3B01200
Entry
OCA4_pHCG3B01200  CDS       T01967                                 
Symbol
trbL
Name
(GenBank) conjugal transfer protein TrbL
  KO
K07344  type IV secretion system protein TrbL
Organism
oco  Afipia carboxidovorans OM4
Pathway
oco02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:oco00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    OCA4_pHCG3B01200 (trbL)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:oco02044]
    OCA4_pHCG3B01200 (trbL)
Secretion system [BR:oco02044]
 Type IV secretion system
  Trb secretion system protein
   OCA4_pHCG3B01200 (trbL)
SSDB
Motif
Pfam: TrbL Milton
Other DBs
NCBI-ProteinID: AEI04563
LinkDB
Position
pHCG3B:complement(125893..127089)
AA seq 398 aa
MLTHDRGGIPVVILVLMLLATPALAQDGSVLTTLENQVVTAAKGWESTVMQAARSLFWIL
AAIEIGVAAIWLALQAASLDSWFAELVRRILFIGLFAFILDRGPSFAKAIVNSLFQIGAG
GGDASPANVFNAGLKVASAMSEKAKFGLFEDNALAIAAVLAMVVVVVAFSLVAAIFVSVM
VEMYVGLLAGMIMLGLGGSSFTKDFTIRYLVYAFSVGMKLMALVMIARIGSEVLLGLANE
PSSGDQYLKTLAIAGISVVVFMVSMYVPSIIQGVVQGVSVTGGMEVLRAGGQVASFAGGA
ASMAAGAASLGAGAARAGASSFGDARNAGSSFGAAALKGMGEGIAAAGSSLASAARDKAI
GIPGTWGASTLGLANAKLSERRNQTPSGQRQNNVDERQ
NT seq 1197 nt   +upstreamnt  +downstreamnt
atgttgactcacgatcgaggcggtatcccggtcgtcatccttgtgctgatgctgctggcg
acgccggcgttggcgcaggacggcagcgttctgacgacgttggagaaccaggtcgtgacc
gcggcgaagggctgggaatccacggtgatgcaggcggcgcggtcgctgttctggattctc
gcggccatcgagatcggcgttgcggcgatctggctggcgctacaagccgcctcgctcgac
agttggttcgccgagctcgtgcgccgcatcctttttatcggccttttcgcctttatcctc
gaccgtggcccaagtttcgcaaaggctatcgtcaacagccttttccagattggcgccggt
ggcggtgatgcctcgccggcgaacgttttcaatgcgggcctgaaggtcgcttccgcaatg
tcggaaaaggcgaagttcggtttgttcgaggataatgcgctggcgatcgcggcggtgttg
gcgatggtcgtcgttgtcgtcgcattctcactggtcgccgccatcttcgtctctgtgatg
gtggaaatgtatgttgggctgctcgctggcatgatcatgcttggcctcggcggctcgtcc
ttcaccaaggatttcactatccgctatcttgtctacgccttcagcgtcggcatgaagctg
atggccttggtgatgatcgcgcgcattggctcggaggtgctactgggcctcgccaatgag
ccgtcgagcggcgatcaatatctcaagaccctggccatcgcgggcatctccgtcgtcgtc
tttatggtgtcgatgtacgttccgagcatcattcagggcgttgtccagggagtatcagtc
acgggtggcatggaggtgctgcgcgccggcggtcaggtcgcgtcgtttgcgggtggggcg
gcctcgatggccgcaggcgcggcatctcttggcgccggtgcggcgcgtgccggcgcatcc
agttttggtgacgcgcgcaacgccggcagttcgttcggcgcggctgcgctgaaggggatg
ggtgagggcatcgcggcggcgggctcttcgcttgcatcagcggcacgcgacaaggcaatt
gggattccggggacgtggggcgcgtccacgcttggtttggccaatgcgaagctttccgag
cggcgtaaccagacgccatccgggcaacgtcaaaacaacgtggatgagcgtcaataa

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