Ornithinimicrobium cryptoxanthini: NF557_04250
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Entry
NF557_04250 CDS
T08994
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ocp
Ornithinimicrobium cryptoxanthini
Pathway
ocp03420
Nucleotide excision repair
ocp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ocp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NF557_04250
03430 Mismatch repair
NF557_04250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocp03400
]
NF557_04250
Enzymes [BR:
ocp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NF557_04250
DNA repair and recombination proteins [BR:
ocp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NF557_04250
MMR (mismatch excision repair)
Other MMR factors
NF557_04250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
USQ77971
LinkDB
All DBs
Position
892593..894620
Genome browser
AA seq
675 aa
AA seq
DB search
MCVLAGAGTGKTRAITHRIAYGVWSGAYQPHQVLAVTFTARAAGEMRTRLRGLGVPGVQA
RTFHAAALRQLQYFWPQAVGGAPPDVVAHKAPAVAEAAGRLRLRLDRPALRDLASEIEWA
KVNLITPQAYPAAVQHLRDGVAGLDLTAVARVMSAYEDVKGERHVIDFEDVLLLMVGVLD
AHPRIAASVRDQYRHFVVDEYQDVNPVQQQLLELWAGGRDEVCVVGDPAQTIYSFTGASP
KHLLEFPKRHPDATVVRLVRNYRSTPQIVQVANLVLGSAARGGVDLQAQREAGPAPTLTA
YPDDVAEAAGVAAQIRKLVDAGTDASEIAVLFRTNAQSEAVESALARQDVPYLVRGGERF
FSRPEVRQAIVLLRGAARGDSSTRPLGEVVRDVLGGAGWSPQQPAAGAASRERWESLQAL
ANLSDDLAAVDPEMRIPGLVAELDRRAAEQHAPTVQGVTLASLHAAKGLEWEVVCIIGCS
EGLLPVSMAEGAERIEEERRLLYVGLTRARRTLLLSWAAARGAGGRAGRSPSRFLRPAGR
LLGLSDATSARTPKPAAKRAPRPKNCRTCGTVLGSAAERKIGRCAECPPTYDEATFERLR
DWRLATSRDQDVPAFVVFTDATLTAIAESGPTTLQGLADIAGVGPRKLELYGADVLTVLA
GQKVDDGTGKNTSDK
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgtcctcgccggggccgggacgggcaagacccgggcgatcacgcaccgcatcgcg
tatggcgtgtggtccggggcctaccagccgcaccaggtgctggcggtcaccttcacggcc
agggctgccggcgagatgcgcacgcgactgcgtgggctcggcgtccccggtgtgcaggcc
cgcaccttccacgcggcggcactgcgccagctgcagtacttctggccccaggctgtgggc
ggtgcaccacctgacgtcgtcgcgcacaaggcccctgcggtcgcggaggccgcaggacgg
ctccggctgcggctggaccgtccggcgctgcgtgacctcgcgtccgagatcgagtgggcc
aaggtcaacctgatcaccccacaggcctatcccgccgctgtccagcacctgcgcgacggc
gtcgcgggcctcgacctgacggcggtcgcccgcgtgatgagcgcctacgaggacgtcaag
ggcgagcgacacgtcatcgacttcgaggatgtgctcctgctcatggtcggcgtcctcgac
gcgcacccgaggatcgctgcctcggtgcgcgaccagtaccgccacttcgtggtcgacgag
taccaggacgtcaacccggtccagcaacagctgctcgagctgtgggccggtggccgcgac
gaggtctgcgtggtgggcgaccccgcccagaccatctactccttcaccggcgcctcaccc
aagcacctgctcgagttcccgaagcggcacccggacgccaccgtcgtgcggttggtgcgc
aactatcgctccaccccccagatcgtccaggtggccaacctcgtgctcggctcggccgcg
cgcggcggtgtcgacctccaggcccaacgtgaggcaggtccggcccccacgctcacggca
taccctgatgatgtcgcggaggccgcgggggtcgcggcacagatcaggaagttggtcgac
gcaggcacggatgccagcgagatcgcggtcctcttccgcaccaatgcgcagtccgaggcg
gtggagtcggccctcgccaggcaggacgtgccctacctggtgcgtgggggagagcgcttc
ttctctcgccccgaggtccgtcaggccatcgtgctgctgcgcggggcggcgcgcggtgac
agcagcaccaggccactgggagaggtggtgcgcgacgtgctcggtggcgccggctggagc
ccacagcaacccgccgcgggggcagcctcccgcgagcgctgggagtcgctgcaggcgctg
gccaacctcagcgacgacctggccgccgtcgatcccgagatgcggatccccggcctggtc
gccgagctcgaccggcgcgcggccgagcagcacgcgccgaccgtgcagggagtcaccctg
gcgtcgttgcacgcggccaaggggctggagtgggaggtcgtctgcatcatcgggtgcagc
gagggtctgctcccggtgtcgatggccgagggagctgagcggatcgaggaggagcgccgg
ctcctctatgtcgggttgacccgcgcgcgtcggacgctgctgctgagctgggccgcggcc
cgcggggcaggagggcgggccggccgcagcccgtcgcggttcctgagaccggccggacgt
ctgctgggcctgtcggacgcgacgtcggcacggacacccaagccggccgccaagcgcgca
ccccgacccaagaactgccgcacctgcgggaccgtcctgggctcggcggcagaacgaaag
atcgggcggtgtgccgaatgcccgccgacctacgacgaggccacattcgagcggttgcgc
gattggcgtctggcgacgtcgcgggaccaggacgtgccggcgttcgtcgtcttcaccgac
gccaccctgaccgcgatcgcggagtccgggccgacaaccctgcagggtctcgctgacatc
gcgggggtaggaccacgcaaactggagctttacggcgccgatgtgctgaccgttcttgct
ggtcagaaggttgacgacgggactggcaaaaatacttccgataaatag
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