Ornithinimicrobium cryptoxanthini: NF557_08290
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Entry
NF557_08290 CDS
T08994
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ocp
Ornithinimicrobium cryptoxanthini
Pathway
ocp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ocp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NF557_08290 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocp03400
]
NF557_08290 (ruvB)
Enzymes [BR:
ocp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NF557_08290 (ruvB)
DNA repair and recombination proteins [BR:
ocp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NF557_08290 (ruvB)
RecFOR pathway proteins
NF557_08290 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
nSTAND3
AAA_22
AAA_14
Mg_chelatase
RNA_helicase
AAA_3
Sigma54_activ_2
NTPase_1
AAA_19
Zeta_toxin
AAA_18
ABC_tran
AAA_25
IstB_IS21
NPHP3_N
TsaE
NACHT
Rad17
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
USQ78014
LinkDB
All DBs
Position
1804388..1805491
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AA seq
367 aa
AA seq
DB search
MSADGPDRAGDGSVDATARVVDGAAATDEERQVEAALRPRRLAEFPGQQRVRDQLGLVLE
AARRRQAPPDHVLLSGPPGLGKTTLAMIISAELEQPMRITSGPAIQHAGDLAAVLSSLVE
GEVLFVDEIHRMARPAEELLYLAMEDFRVDVIVGKGPGATAIPLELPPFTVVGATTRAGL
LPAPLRDRFGFTGHLDYYSTEDLQRILVRSAGLLEIEATRDGIYEIASRSRGTPRIANRL
LRRVRDWAQVHGQHIVDHEAALAALELFDVDQQGLDRLDRAVLEALCKRFGGGPVGLGTL
AVAVGEEPDTVETVAEPYLVREGYIVRTPRGRSASRTAWEHLGLTPPHPGVAQDQLPIGE
QPGRLDH
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
ctgtccgccgatggccccgaccgtgccggtgacggctccgtcgacgccaccgcccgcgtg
gttgacggagccgccgccacggacgaggagcggcaggtcgaggccgcactgcggccccgc
cggctcgcggagttccccggccagcagagggtgcgtgaccagctcggcctcgtgctggag
gccgcgcgtcgcaggcaggccccaccggaccacgtgctgctctcgggcccgcctggcctt
ggcaagaccaccctggcaatgatcatctcggccgagctcgaacaaccgatgcggatcacc
agcgggccggccatccagcatgccggcgacctggccgcggtgctgtcctcgctcgtcgag
ggcgaggtcctcttcgtcgacgagatccaccggatggcccggcccgccgaggagctgctc
tatctggcgatggaggacttccgggtcgacgtcatcgtcggcaagggacccggggccacc
gccatcccgctggagctgccaccgttcacggtggtgggcgccaccacccgcgccggcctg
ctcccggcaccgttgcgggaccggttcggcttcaccgggcacctcgactactactcgacc
gaggacctccagcggatcctggtccgcagcgccgggctgctggagatcgaggccacccgc
gacggcatctatgagatcgcctcacgctcccgaggcaccccgcggatcgccaaccggctg
ctgcgacgggtccgggactgggcccaggtgcacggccagcacatcgtggaccatgaggcg
gccctcgcggcactcgagctgttcgacgtcgaccagcagggtctggaccggctcgaccgt
gccgtcctcgaggcgctgtgcaagaggttcggcgggggaccggtcggtctgggcaccctg
gccgtcgctgtcggtgaggagccggacacggtcgagaccgtggccgagccctacctcgtg
cgggagggttacatcgtccgcaccccgcgcggccggtcggcctcgcgcaccgcctgggag
cacctcgggctgacgccaccccacccgggcgtcgcccaggaccagctgccgatcggggag
cagcccggtcgtctcgaccactga
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